ggKbase home page

13_1_40cm_scaffold_16003

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_16003_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3..203)
DNA (201bp) protein (67aa)
pit; low-affinity inorganic phosphate transporter; K03306 inorganic phosphate transporter, PiT family Tax=RBG_16_Actinobacteria_67_10_curated
pit; low-affinity inorganic phosphate transporter
Phosphate/sulphate permease id=3122079 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_16003_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(203..817)
DNA (615bp) protein (205aa)
hypothetical protein; K07220 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative phosphate transport regulator
Uncharacterized protein id=1900756 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_16003_3
unknown

Not on your lists

comp(879..1091)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_16003_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(1335..1598)
DNA (264bp) protein (88aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_scaffold_16003_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2476..3486
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH4_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Radical SAM domain protein
13_1_40cm_scaffold_16003_6

Not on your lists

comp(3493..4404)
DNA (912bp) protein (304aa)
Conserved protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR8_9BACT
Conserved protein {ECO:0000313|EMBL:AHN97952.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
hypothetical protein
13_1_40cm_scaffold_16003_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4580..5863
DNA (1284bp) protein (428aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K14161 protein ImuB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5S3_SPHTD
13_1_40cm_scaffold_16003_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5877..6152
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5S4_SPHTD
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_40cm_scaffold_16003_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6208..9501
DNA (3294bp) protein (1098aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RBG_16_Actinobacteria_67_10_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=uncultured bacterium W5-102b RepID=H9BWL6_9BACT
13_1_40cm_scaffold_16003_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9510..10046
DNA (537bp) protein (179aa)
methionine sulfoxide reductase A; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=24524921 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptide methionine sulfoxide reductase
13_1_40cm_scaffold_16003_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10047..10988)
DNA (942bp) protein (314aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent DNA helicase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000381915D
DEAD/DEAH box helicase
Displaying 11 items

View Taxonomy