ggKbase home page

13_1_40cm_scaffold_3870

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3870_1
unknown

Not on your lists

1..138
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_scaffold_3870_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

142..570
DNA (429bp) protein (143aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A973_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=GWC2_Gemmatimonadetes_71_10_curated
Biopolymer transport protein ExbD/TolR
13_1_40cm_scaffold_3870_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

757..1494
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A972_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91151.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_3870_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1601..2962
DNA (1362bp) protein (454aa)
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amino acid permease-associated region id=3114221 bin=GWA2_Ignavibacteria_55_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
amino acid transporter
13_1_40cm_scaffold_3870_5
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2959..4254
DNA (1296bp) protein (432aa)
Sodium:dicarboxylate symporter family protein id=3114362 bin=GWA2_Ignavibacteria_55_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sodium:dicarboxylate symporter family protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
sodium:dicarboxylate symporter family protein
13_1_40cm_scaffold_3870_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4275..5093)
DNA (819bp) protein (273aa)
Putative N-acetylglucosamine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A969_GEMAT
putative N-acetylglucosamine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase BadF/BadG/BcrA/BcrD type
13_1_40cm_scaffold_3870_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5057..6622)
DNA (1566bp) protein (522aa)
Putative sodium/solute symporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A968_GEMAT
putative sodium/solute symporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative sodium/solute symporter
13_1_40cm_scaffold_3870_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6713..7072)
DNA (360bp) protein (120aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A966_GEMAT
erpA; putative iron-sulfur cluster insertion protein ErpA Tax=RBG_16_Gemmatimonadetes_66_8_curated
iron-sulfur cluster assembly accessory protein
13_1_40cm_scaffold_3870_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7226..8446)
DNA (1221bp) protein (407aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
Beta-lactamase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH34_RHOM4
beta-lactamase
13_1_40cm_scaffold_3870_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8443..10098)
DNA (1656bp) protein (552aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Beta-lactamase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH34_RHOM4
glycoside hydrolase family 3 domain protein
13_1_40cm_scaffold_3870_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10198..11436
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bacillus marmarensis DSM 21297 RepID=U6SQ82_9BACI
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_3870_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11497..12186
DNA (690bp) protein (230aa)
putative phosphatidylinositol synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
CDP-alcohol phosphatidyltransferase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UEM2_CELFN
CDP-alcohol phosphatidyltransferase
13_1_40cm_scaffold_3870_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12350..13204
DNA (855bp) protein (285aa)
inositol-3-phosphate synthase (EC:5.5.1.4); K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000362AE6E
Myo-inositol-1-phosphate synthase
Displaying 13 items

View Taxonomy