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13_1_40cm_scaffold_4662

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4662_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1..1827)
DNA (1827bp) protein (609aa)
Histidine kinase (EC:2.7.13.3)
multi-sensor signal transduction histidine kinase id=14626073 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
multi-sensor signal transduction histidine kinase Tax=CSP1_6_Rokubacteria
13_1_40cm_scaffold_4662_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2065..3462)
DNA (1398bp) protein (466aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=3102610 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=GWC2_Rokubacteria_70_16_curated
Fis family transcriptional regulator
13_1_40cm_scaffold_4662_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3459..5354)
DNA (1896bp) protein (632aa)
peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidylprolyl cis-trans isomerase, putative id=4433399 bin=GWC2_Methylomirabilis_70_16 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidylprolyl cis-trans isomerase
13_1_40cm_scaffold_4662_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(5351..6190)
DNA (840bp) protein (280aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
tRNA (Adenine-N(1)-)-methyltransferase id=4549106 bin=GWA2_Methylomirabilis_73_35 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA (adenine-N(1)-)-methyltransferase
13_1_40cm_scaffold_4662_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(6187..6438)
DNA (252bp) protein (84aa)
arabinose efflux permease family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein id=14625329 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator transporter
13_1_40cm_scaffold_4662_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6429..7310)
DNA (882bp) protein (294aa)
major facilitator transporter; K08223 MFS transporter, FSR family, fosmidomycin resistance protein Tax=GWA2_Rokubacteria_73_35_curated
fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein id=14625329 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator transporter
13_1_40cm_scaffold_4662_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7352..7822
DNA (471bp) protein (157aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative glyoxalase; K07104 id=14625328 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
extradiol ring-cleavage dioxygenase
13_1_40cm_scaffold_4662_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7729..8859)
DNA (1131bp) protein (377aa)
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
major facilitator superfamily protein id=14625327 bin=bin7_NC10_sister species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator superfamily protein
13_1_40cm_scaffold_4662_9
R_NC10_66_22, NC10, Bacteria

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comp(8955..9524)
DNA (570bp) protein (190aa)
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Acyl-CoA dehydrogenase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU35_KORVE
acyl-CoA dehydrogenase
Displaying 9 items

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