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13_1_40cm_scaffold_4999

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4999_1
unknown

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comp(2..403)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_scaffold_4999_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(487..2538)
DNA (2052bp) protein (684aa)
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I2_GEMAT
putative two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative two-component histidine kinase
13_1_40cm_scaffold_4999_3
Fusarium fujikuroi, Fusarium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

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2619..3326
DNA (708bp) protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:CCT73093.1}; TaxID=1279085 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusar
hypothetical protein
13_1_40cm_scaffold_4999_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4487..5236
DNA (750bp) protein (250aa)
creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Creatininase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRU4_CLOPH
Creatininase
13_1_40cm_scaffold_4999_5
unknown

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5233..5571
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_scaffold_4999_6
unknown

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5571..5798
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_scaffold_4999_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5912..7387
DNA (1476bp) protein (492aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I0_GEMAT
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane efflux protein
13_1_40cm_scaffold_4999_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7406..8653
DNA (1248bp) protein (416aa)
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H9_GEMAT
secretion protein HlyD family protein; K02005 HlyD family secretion protein Tax=GWC2_Gemmatimonadetes_71_10_curated
efflux transporter, RND family, MFP subunit
13_1_40cm_scaffold_4999_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8650..9378
DNA (729bp) protein (243aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter ATP-binding protein
13_1_40cm_scaffold_4999_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9380..10618
DNA (1239bp) protein (413aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H7_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter permease protein
13_1_40cm_scaffold_4999_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11041..11766
DNA (726bp) protein (242aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H4_GEMAT
MacB-like periplasmic core domain protein
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG90435.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_4999_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11896..13140
DNA (1245bp) protein (415aa)
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
ABC efflux pump, inner membrane subunit id=24436238 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_40cm_scaffold_4999_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13144..14385
DNA (1242bp) protein (414aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBT1_9BACT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_1_40cm_scaffold_4999_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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14472..15200
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_4999_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15220..16395
DNA (1176bp) protein (392aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G3_GEMAT
aminotransferase class V
Aminotransferase class V {ECO:0000313|EMBL:AHG90429.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_4999_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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16496..17362
DNA (867bp) protein (289aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G2_GEMAT
tRNA-specific 2-thiouridylase mnmA
Displaying 16 items

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