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13_1_40cm_scaffold_17821_3

Organism: 13_1_40CM_Gemmatimonadetes_70_11

partial RP 14 / 55 MC: 2 BSCG 16 / 51 MC: 3 ASCG 7 / 38
Location: comp(2165..2326)

Top 3 Functional Annotations

Value Algorithm Source
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 50.0
  • Bit_score: 62
  • Evalue 1.50e-07
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 54.0
  • Bit_score: 66
  • Evalue 1.10e-08

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 162
GTGACGAGCGGCCTGGCCGAGAAGGACACCGTGCTGCTGCTGCCGAGCGCGTCGCTGGTGCAGTCCCAGACGGACATGAAGAACCGCTTCCAGAACATGACCGGCGGGGGGCTACCGGGCCTGCGCCAGCAGAGCGGCGGCAGCGGGACGACGAAGAACTAG
PROTEIN sequence
Length: 54
VTSGLAEKDTVLLLPSASLVQSQTDMKNRFQNMTGGGLPGLRQQSGGSGTTKN*