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13_1_40cm_scaffold_17821

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_17821_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..738)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037C633C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93236.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_17821_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(948..2162)
DNA (1215bp) protein (405aa)
Putative macrolide efflux ABC transporter permease n=3 Tax=Myxococcus RepID=F8CKF2_MYXFH id=5224471 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
macrolide efflux ABC transporter permease
13_1_40cm_scaffold_17821_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2165..2326)
DNA (162bp) protein (54aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_17821_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2648..4318)
DNA (1671bp) protein (557aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter ATP-binding protein
13_1_40cm_scaffold_17821_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4315..5637)
DNA (1323bp) protein (441aa)
Putative outer membrane macrolide efflux protein n=2 Tax=Myxococcus RepID=Q1D4Q0_MYXXD id=5224473 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
outer membrane macrolide efflux protein Tax=RBG_16_RIF_WS3X_71_46_curated
outer membrane efflux protein
13_1_40cm_scaffold_17821_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5639..6046)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INF2_ANADE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_17821_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6142..6510)
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_17821_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6507..7127)
DNA (621bp) protein (207aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_scaffold_17821_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7117..8511)
DNA (1395bp) protein (465aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NES6_9GAMM
phospholipase D/transphosphatidylase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phospholipase
13_1_40cm_scaffold_17821_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8508..9083)
DNA (576bp) protein (192aa)
Metal dependent phosphohydrolase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJK6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metal dependent phosphohydrolase
13_1_40cm_scaffold_17821_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9074..10900)
DNA (1827bp) protein (609aa)
Asparagine synthetase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE87_SINAD
asparagine synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
asparagine synthase
13_1_40cm_scaffold_17821_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10900..12162)
DNA (1263bp) protein (421aa)
UDP phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase n=1 Tax=Ralstonia solanacearum RepID=UPI0001816C87
dolichyl-phosphate-mannose-protein mannosyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pmrK; lipid a biosynthesis protein
Displaying 12 items

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