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13_1_40cm_scaffold_1418

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1418_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(3..584)
DNA (582bp) protein (194aa)
Methyltransferase type 11 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TI4_SOLUE
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABJ87036.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
13_1_40cm_scaffold_1418_2
unknown

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782..1039
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_scaffold_1418_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1067..2374
DNA (1308bp) protein (436aa)
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-binding region ATPase domain protein
Integral membrane sensor signal transduction histidine kinase id=1746130 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1418_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2325..3086
DNA (762bp) protein (254aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B6_GEMAT
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AHG87878.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1418_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3090..3983)
DNA (894bp) protein (298aa)
HTH-type transcriptional regulator CysL n=2 Tax=Paenibacillus RepID=F5LPC5_9BACL
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
LysR family transcriptional regulator
13_1_40cm_scaffold_1418_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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4090..4752
DNA (663bp) protein (221aa)
alkyl hydroperoxide reductase (EC:1.11.1.7) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
alkyl hydroperoxide reductase (EC:1.11.1.7)
Peroxiredoxin n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLH8_9RHIZ
13_1_40cm_scaffold_1418_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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4920..5534
DNA (615bp) protein (205aa)
Methyltransferase type 11 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF71_ANADF
type 11 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
type 11 methyltransferase
13_1_40cm_scaffold_1418_8
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5699..6421
DNA (723bp) protein (241aa)
Metallo-beta-lactamase family protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QEA3_METSZ
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:CDX39497.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
metallo-beta-lactamase family protein
13_1_40cm_scaffold_1418_9
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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6384..7679
DNA (1296bp) protein (432aa)
major facilitator superfamily transporter id=14623769 bin=bin5_DeltaP species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
major facilitator superfamily transporter Tax=CSP1_8_Deltaproteobacteria
MFS transporter
13_1_40cm_scaffold_1418_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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7765..8430
DNA (666bp) protein (222aa)
HpcH/HpaI aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
garL; 2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
Putative uncharacterized protein n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI23_9BACT
13_1_40cm_scaffold_1418_11

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8499..9479
DNA (981bp) protein (327aa)
Putative alpha/beta hydrolase fold n=1 Tax=uncultured marine microorganism HF4000_009G21 RepID=B3T1B2_9ZZZZ
Putative alpha/beta hydrolase fold {ECO:0000313|EMBL:ABZ06371.1}; TaxID=455515 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009G21.;"
alpha/beta hydrolase fold protein
13_1_40cm_scaffold_1418_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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9557..11113
DNA (1557bp) protein (519aa)
Smu15B n=1 Tax=uncultured organism RepID=Q0GNJ0_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_1418_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11121..12326
DNA (1206bp) protein (402aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDT3_RHOMR
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:AEN72453.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
13_1_40cm_scaffold_1418_14
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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12494..13111
DNA (618bp) protein (206aa)
Polyketide cyclase / dehydrase and lipid transport n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZDB9_TERRK
polyketide cyclase/dehydrase and lipid transport
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:AFL87237.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus
13_1_40cm_scaffold_1418_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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13129..13635
DNA (507bp) protein (169aa)
ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 id=12557642 bin=CNBR_ACIDO species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribosomal protein S1
Displaying 15 items

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