ggKbase home page

13_1_40cm_scaffold_1656

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1656_1
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1416)
DNA (1416bp) protein (472aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TBX8_BURPP
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ACD19776.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" s
13_1_40cm_scaffold_1656_2
unknown

Not on your lists

1634..2095
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_scaffold_1656_3
unknown

Not on your lists

2099..2416
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_scaffold_1656_4
unknown

Not on your lists

comp(2850..3428)
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_40cm_scaffold_1656_5
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3787..4650)
DNA (864bp) protein (288aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ72345.1}; Flags: Fragment;; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides
13_1_40cm_scaffold_1656_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4886..6544)
DNA (1659bp) protein (553aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=12554865 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1656_7
unknown

Not on your lists

comp(6534..6821)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_scaffold_1656_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6818..9898)
DNA (3081bp) protein (1027aa)
Acriflavin resistance protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZP1_9BACT
Acriflavin resistance protein {ECO:0000313|EMBL:EDY20205.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acriflavin resistance protein
13_1_40cm_scaffold_1656_9
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(9898..11025)
DNA (1128bp) protein (376aa)
efflux pump, RND family, membrane fusion protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Efflux pump, RND family, membrane fusion protein id=1718177 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RND family efflux pump membrane fusion protein
13_1_40cm_scaffold_1656_10
unknown

Not on your lists

comp(11045..11656)
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_40cm_scaffold_1656_11
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11841..13151
DNA (1311bp) protein (437aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QHL0_9NOSO
GAF sensor signal transduction histidine kinase
GAF sensor signal transduction histidine kinase {ECO:0000313|EMBL:AFY44843.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
13_1_40cm_scaffold_1656_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13141..13791
DNA (651bp) protein (217aa)
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C13CA1
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF58425.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3
two-component response regulator
13_1_40cm_scaffold_1656_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(13853..15091)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG20_9BACT id=1244724 bin=RBG9 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG9 organism_group=Chloroflexi
Protein of unknown function (DUF1006) Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
protein of unknown function DUF1006
13_1_40cm_scaffold_1656_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15099..16124
DNA (1026bp) protein (342aa)
Serine/threonine protein kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LYB3_HALO1
serine/threonine protein kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
protein kinase
13_1_40cm_scaffold_1656_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

16199..16558
DNA (360bp) protein (120aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5U8_9CHLR
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:EFH80359.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source=
TraR/DksA family transcriptional regulator
13_1_40cm_scaffold_1656_16
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

16617..17375
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AP49_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KER10909.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
13_1_40cm_scaffold_1656_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17469..19922
DNA (2454bp) protein (818aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S52_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87518.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_scaffold_1656_18
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19942..20499)
DNA (558bp) protein (186aa)
Trans-acting enoyl reductase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NZ37_9BACT
Saccharopine dehydrogenase Tax=RBG_16_Gamma2_60_9_curated
Saccharopine dehydrogenase
13_1_40cm_scaffold_1656_19
unknown

Not on your lists

20769..21089
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_scaffold_1656_20
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21167..22120)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036BA85E
Uncharacterized protein {ECO:0000313|EMBL:KIF23433.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
esterase/lipase
13_1_40cm_scaffold_1656_21
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22117..23226)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B2FCCB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
13_1_40cm_scaffold_1656_22
R_NC10_66_22, NC10, Bacteria

Not on your lists

23381..23731
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP06_NITGG
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_scaffold_1656_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

23975..26317
DNA (2343bp) protein (781aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021T3_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
Displaying 23 items

View Taxonomy