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13_1_40cm_scaffold_1723

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1723_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..1205)
DNA (1203bp) protein (401aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Aldehyde dehydrogenase id=1250029 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
aldehyde dehydrogenase
13_1_40cm_scaffold_1723_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1426..1824
DNA (399bp) protein (133aa)
two-component hybrid histidine kinase (EC:2.7.3.-)
Two-component hybrid histidine kinase n=1 Tax=Sorangium cellulosum (strain So ce56) PF1_SORC5">RepID=A9EPF1_SORC5
response regulator receiver sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_1723_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1905..2186
DNA (282bp) protein (94aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_1723_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(2490..3917)
DNA (1428bp) protein (476aa)
Peptidase M28 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR4_9BACT
peptidase M28 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
peptidase M28
13_1_40cm_scaffold_1723_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4040..5077)
DNA (1038bp) protein (346aa)
id=12555467 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=12555467 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_1723_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5131..5967)
DNA (837bp) protein (279aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555468 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative integral membrane protein
13_1_40cm_scaffold_1723_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5964..6920)
DNA (957bp) protein (319aa)
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ABC transporter-like protein id=12555469 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter-like protein
13_1_40cm_scaffold_1723_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6917..7756)
DNA (840bp) protein (280aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555470 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1723_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7909..8844)
DNA (936bp) protein (312aa)
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein id=12555471 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter-like protein
13_1_40cm_scaffold_1723_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8872..9444)
DNA (573bp) protein (191aa)
Metal dependent phosphohydrolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTK7_KYRT2
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
metal dependent phosphohydrolase
13_1_40cm_scaffold_1723_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9435..9758)
DNA (324bp) protein (108aa)
gltS; sodium/glutamate symport carrier protein Tax=RBG_16_Acidobacteria_70_10_curated
sodium/glutamate symporter; K03312 glutamate:Na+ symporter, ESS family id=24489649 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Rhodanobacter spathiphylli genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
sodium:glutamate symporter
13_1_40cm_scaffold_1723_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10028..10480
DNA (453bp) protein (151aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1723_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10617..12128
DNA (1512bp) protein (504aa)
amino acid transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B54BD9
amino acid permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
amino acid permease
13_1_40cm_scaffold_1723_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12084..12527)
DNA (444bp) protein (148aa)
Hydrolase, NUDIX family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3W2_ACIC5
hydrolase, NUDIX family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
NUDIX family hydrolase
Displaying 14 items

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