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13_1_40cm_scaffold_249

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_249_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(207..1622)
DNA (1416bp) protein (472aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Acidobact
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=12554196 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
13_1_40cm_scaffold_249_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1622..3211)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003481D01
phosphoenolpyruvate carboxykinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphoenolpyruvate carboxykinase
13_1_40cm_scaffold_249_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

3327..4019
DNA (693bp) protein (231aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12554198 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_scaffold_249_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4016..4648
DNA (633bp) protein (211aa)
id=12554199 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_scaffold_249_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4866..6038
DNA (1173bp) protein (391aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=12554200 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2)
13_1_40cm_scaffold_249_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6035..6292)
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_scaffold_249_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6403..6711
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036E1421
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_249_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

6830..7297
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CE16_ACAM1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_scaffold_249_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7294..9039
DNA (1746bp) protein (582aa)
outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
outer membrane protein id=12554202 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane protein
13_1_40cm_scaffold_249_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9014..10351
DNA (1338bp) protein (446aa)
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
macA; acrolide-specific efflux protein MacA id=12554203 bin=CNBR_ACIDO species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
macA; acrolide-specific efflux protein MacA
13_1_40cm_scaffold_249_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10398..13556
DNA (3159bp) protein (1053aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12554204 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acriflavin resistance protein
13_1_40cm_scaffold_249_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13710..15443
DNA (1734bp) protein (578aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=12554205 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RND family efflux transporter MFP subunit
13_1_40cm_scaffold_249_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15553..16305
DNA (753bp) protein (251aa)
ybbA; transporter subunit: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC-type antimicrobial peptide transport system,ATPase component id=12554206 bin=CNBR_ACIDO species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ybbA; transporter subunit: ATP-binding component of ABC superfamily
13_1_40cm_scaffold_249_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

16579..17796
DNA (1218bp) protein (406aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein; K02004 putative ABC transport system permease protein id=12554207 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multidrug ABC transporter substrate-binding protein
13_1_40cm_scaffold_249_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17800..18981
DNA (1182bp) protein (394aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G433_GEOUR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ26551.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source=
13_1_40cm_scaffold_249_16
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18978..19616
DNA (639bp) protein (213aa)
Acriflavin resistance protein n=1 Tax=Nostoc sp. PCC 7107 RepID=K9Q7U6_9NOSO
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AFY41750.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
Displaying 16 items

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