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13_1_40cm_scaffold_2582

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2582_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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2..172
DNA (171bp) protein (57aa)
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_2582_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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165..938
DNA (774bp) protein (258aa)
ABC-2 type transporter; K01992 ABC-2 type transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC-2 type transporter; K01992 ABC-2 type transport system permease protein id=12556775 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC-2 type transporter
13_1_40cm_scaffold_2582_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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1037..2623
DNA (1587bp) protein (529aa)
gliding motility ABC transporter auxillary protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
gliding motility ABC transporter auxillary protein id=12556776 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gliding motility ABC transporter auxillary protein
13_1_40cm_scaffold_2582_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2770..4119
DNA (1350bp) protein (450aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12556777 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_2582_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4116..5705
DNA (1590bp) protein (530aa)
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4); K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] id=12556778 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase
13_1_40cm_scaffold_2582_6

Not on your lists

comp(5782..6165)
DNA (384bp) protein (128aa)
VCBS {ECO:0000313|EMBL:AHZ45572.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_scaffold_2582_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(6232..7548)
DNA (1317bp) protein (439aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
threonyl/alanyl tRNA synthetase SAD; K07050 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative alanyl-transfer RNA synthetase; K07050 id=12556787 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_2582_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7502..9010)
DNA (1509bp) protein (503aa)
periplasmic sensor signal transduction histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative Histidine kinase id=4329535 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
integral membrane sensor signal transduction histidine kinase
13_1_40cm_scaffold_2582_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9322..10005)
DNA (684bp) protein (228aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DXJ3_9GAMM
preQ(0) biosynthesis protein QueC; K06920 queuosine biosynthesis protein QueC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
preQ(0) biosynthesis protein QueC
13_1_40cm_scaffold_2582_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(10002..10643)
DNA (642bp) protein (214aa)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
putative radical-activating enzyme, radical SAM superfamily; K10026 queuosine biosynthesis protein QueE id=12556789 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
radical SAM protein
Displaying 10 items

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