ggKbase home page

13_1_40cm_scaffold_2594

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2594_1

Not on your lists

comp(35..364)
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:AHN97862.1}; TaxID=1447236 species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;"
id=12554850 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_2594_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(646..2298)
DNA (1653bp) protein (551aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein id=16791945 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
13_1_40cm_scaffold_2594_3

Not on your lists

comp(2306..3355)
DNA (1050bp) protein (350aa)
Uncharacterized protein {ECO:0000313|EMBL:AHN97863.1}; TaxID=1447236 species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;"
hypothetical protein id=5801244 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
13_1_40cm_scaffold_2594_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3457..4731)
DNA (1275bp) protein (425aa)
L-alanine aminotransferase (EC:2.6.1.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
L-alanine aminotransferase (EC:2.6.1.-) id=12554713 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
L-alanine aminotransferase (EC:2.6.1.-)
13_1_40cm_scaffold_2594_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4862..5806
DNA (945bp) protein (315aa)
von Willebrand factor, type A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
von Willebrand factor, type A id=12556024 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
von Willebrand factor, type A
13_1_40cm_scaffold_2594_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5815..6504
DNA (690bp) protein (230aa)
OmpA/MotB domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
OmpA/MotB domain-containing protein id=12556025 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
OmpA/MotB domain-containing protein
13_1_40cm_scaffold_2594_7
unknown

Not on your lists

6599..6850
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_scaffold_2594_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6961..7344
DNA (384bp) protein (128aa)
amino acid-binding ACT protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Amino acid-binding ACT domain protein id=2136388 bin=GWD2_Deltaproteobacteria_55_8 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amino acid-binding ACT domain-containing protein
13_1_40cm_scaffold_2594_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7457..7636
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_1_40cm_scaffold_2594_10
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

7651..9363
DNA (1713bp) protein (571aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
hypothetical protein id=16791945 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
13_1_40cm_scaffold_2594_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9433..10737)
DNA (1305bp) protein (435aa)
class V aminotransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
class V aminotransferase id=24507801 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
class V aminotransferase
13_1_40cm_scaffold_2594_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10807..11541
DNA (735bp) protein (245aa)
(2Fe-2S)-binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025B8_SOLUE
2Fe-2S iron-sulfur cluster binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
2Fe-2S iron-sulfur cluster binding domain-containing protein
13_1_40cm_scaffold_2594_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11534..13717
DNA (2184bp) protein (728aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRA1_SINAD
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_scaffold_2594_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13942..14940
DNA (999bp) protein (333aa)
molybdopterin dehydrogenase; K11178 xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
oxidoreductase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B68E69
molybdopterin dehydrogenase
13_1_40cm_scaffold_2594_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15227..16045)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP24_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_scaffold_2594_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16102..16950)
DNA (849bp) protein (283aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003708F73
6-phosphogluconate dehydrogenase
13_1_40cm_scaffold_2594_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

17238..17897
DNA (660bp) protein (220aa)
Hypothetical conserved protein n=1 Tax=uncultured planctomycete RepID=H5SDG2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_scaffold_2594_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(18635..19909)
DNA (1275bp) protein (425aa)
aspartate aminotransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Amino acid aminotransferase id=1765630 bin=GWA2_Elusimicrobia_69_24 species=Thermoplasma volcanium genus=Thermoplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
aspartate aminotransferase
Displaying 18 items

View Taxonomy