ggKbase home page

13_1_40cm_scaffold_2693

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2693_1
unknown

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)

This feature has no annotations

13_1_40cm_scaffold_2693_2
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86..670)
DNA (585bp) protein (195aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVZ3_HALO1
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY14127.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangi
13_1_40cm_scaffold_2693_3
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

821..1333
DNA (513bp) protein (171aa)
Alr3729 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YQT8_NOSS1
hypothetical protein
Alr3729 protein {ECO:0000313|EMBL:BAB75428.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
13_1_40cm_scaffold_2693_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2361..3596)
DNA (1236bp) protein (412aa)
Probable polyvinylalcohol dehydrogenase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CGC1_9PLAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
WD40 repeat-like protein
13_1_40cm_scaffold_2693_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3695..5818
DNA (2124bp) protein (708aa)
TonB-dependent receptor n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS31_9BACT
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
TonB-dependent receptor
13_1_40cm_scaffold_2693_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5900..8155
DNA (2256bp) protein (752aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000370EA05
pyrrolo-quinoline quinone repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pyrrolo-quinoline quinone repeat-containing protein
13_1_40cm_scaffold_2693_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8152..9603
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B504C2
pyrrolo-quinoline quinone repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
pyrrolo-quinoline quinone repeat-containing protein
13_1_40cm_scaffold_2693_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9802..10803
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037C9D75
pyrrolo-quinoline quinone repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pyrrolo-quinoline quinone repeat-containing protein
13_1_40cm_scaffold_2693_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

10956..12290
DNA (1335bp) protein (445aa)
coproporphyrinogen dehydrogenase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
coproporphyrinogen dehydrogenase (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPY0_9BACT
13_1_40cm_scaffold_2693_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12447..12854
DNA (408bp) protein (136aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Thioesterase superfamily protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPY4_9BACT
thioesterase
13_1_40cm_scaffold_2693_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13271..14650
DNA (1380bp) protein (460aa)
alkylhalidase n=2 Tax=Gemmata obscuriglobus RepID=UPI00016C544E
tryptophan halogenase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tryptophan halogenase
13_1_40cm_scaffold_2693_12
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14712..15491
DNA (780bp) protein (260aa)
peptidase S1 and S6 chymotrypsin/Hap Tax=RBG_16_Gammaproteobacteria_66_13_curated
TRYPSIN_SER 226..237 id=1243055 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
peptidase S1 and S6 chymotrypsin/Hap
13_1_40cm_scaffold_2693_13
unknown

Not on your lists

15497..16108
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_40cm_scaffold_2693_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

16199..16963
DNA (765bp) protein (255aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKL3_AFIFE
family 1 extracellular solute-binding protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
extracellular solute-binding protein
13_1_40cm_scaffold_2693_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17058..17735
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GD25_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99301.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_1_40cm_scaffold_2693_16
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

17752..18171
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0S7_FLAB3
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
13_1_40cm_scaffold_2693_17
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18174..18536
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LQR9_PHOPR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJR08092.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbuli
13_1_40cm_scaffold_2693_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

18604..19842
DNA (1239bp) protein (413aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_scaffold_2693_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20122..20571
DNA (450bp) protein (150aa)
Hypothetical conserved protein n=1 Tax=uncultured planctomycete RepID=H5SCD3_9BACT
signal peptide-domain containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
signal peptide-domain containing protein
13_1_40cm_scaffold_2693_20
Brachyspira hyodysenteriae, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20637..21515
DNA (879bp) protein (293aa)
Ankyrin repeat-containing protein n=1 Tax=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) RepID=C0QX63_BRAHW
arp; ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:ACN82721.1}; TaxID=565034 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira hyodysenteriae (strai
13_1_40cm_scaffold_2693_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

21622..22926
DNA (1305bp) protein (435aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Pyrrolo-quinoline quinone id=3389967 bin=GWC2_Bacteroidetes_40_22 species=Rhodopirellula sallentina genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Displaying 21 items

View Taxonomy