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13_1_40cm_scaffold_2703

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2703_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..316)
DNA (315bp) protein (105aa)
amidohydrolase 2 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_2703_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(750..3629)
DNA (2880bp) protein (960aa)
TonB-dependent receptor n=1 Tax=uncultured Acidobacteria bacterium A12 RepID=F8TTM0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_scaffold_2703_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3962..4495
DNA (534bp) protein (178aa)
Transcriptional regulator n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGN9_9BACT
Transcriptional regulator {ECO:0000313|EMBL:EEF61090.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pe
ArsR family transcriptional regulator
13_1_40cm_scaffold_2703_4
unknown

Not on your lists

4517..4645
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_scaffold_2703_5
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4668..5843
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJ69_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG04814.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
13_1_40cm_scaffold_2703_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5885..7084
DNA (1200bp) protein (400aa)
GAF sensor signal transduction histidine kinase (EC:2.7.3.-)
GAF sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABG05529.1}; EC=2.7.3.- {ECO:0000313|EMBL:ABG05529.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales
GAF sensor signal transduction histidine kinase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASU9_RUBXD
13_1_40cm_scaffold_2703_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

7081..7707
DNA (627bp) protein (209aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASU8_RUBXD
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABG05530.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae;
13_1_40cm_scaffold_2703_8
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7909..8628
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037EEFDF
Short-chain dehydrogenase {ECO:0000313|EMBL:ESW78989.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
short-chain dehydrogenase protein
13_1_40cm_scaffold_2703_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9029..9697
DNA (669bp) protein (223aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036DCCD4
S-adenosylmethionine tRNA ribosyltransferase-isomerase protein
13_1_40cm_scaffold_2703_10
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9770..10843
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000367F5C5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ08964.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (s
13_1_40cm_scaffold_2703_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10858..12573
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KSL4_9GAMM
SMP-30/gluconolaconase/LRE domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SMP-30/gluconolaconase/LRE domain-containing protein
13_1_40cm_scaffold_2703_12
unknown

Not on your lists

comp(12570..13085)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_scaffold_2703_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13390..13818
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627394 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_2703_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14045..15847)
DNA (1803bp) protein (601aa)
polyvinyl-alcohol dehydrogenase (EC:1.1.2.6); K05889 polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
cytochrome CBB3 n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037A9167
polyvinyl-alcohol dehydrogenase
13_1_40cm_scaffold_2703_15
RLO_Gammaproteobacteria_52_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16117..16497
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036BEC4D
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated
13_1_40cm_scaffold_2703_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16630..17076)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R716_PELHB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_2703_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17165..17680)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D95279
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_2703_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(17680..18243)
DNA (564bp) protein (188aa)
feruloyl esterase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B2F5AD
feruloyl esterase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
feruloyl esterase
Displaying 18 items

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