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13_1_40cm_scaffold_2866

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2866_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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1..2469
DNA (2469bp) protein (823aa)
metal dependent phosphohydrolase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
metal dependent phosphohydrolase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] id=12555871 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UTP:GlnB (protein PII) uridylyltransferase
13_1_40cm_scaffold_2866_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2456..2788
DNA (333bp) protein (111aa)
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
glnB; nitrogen regulatory protein P-II 1; K04751 nitrogen regulatory protein P-II 1 id=12555874 bin=CNBR_ACIDO species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nitrogen regulatory protein P-II
13_1_40cm_scaffold_2866_3
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2785..4125
DNA (1341bp) protein (447aa)
Ammonium transporter n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLF9_CORCM
amt; ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cora
13_1_40cm_scaffold_2866_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4324..5772)
DNA (1449bp) protein (483aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT) id=4115281 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2866_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5765..10384)
DNA (4620bp) protein (1540aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) id=12555866 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
13_1_40cm_scaffold_2866_6
unknown

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10605..10772
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_2866_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11426..12931
DNA (1506bp) protein (502aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022M4_SOLUE
Displaying 7 items

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