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13_1_40cm_scaffold_2968

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2968_1
unknown

Not on your lists

comp(206..958)
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_40cm_scaffold_2968_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3043..3735)
DNA (693bp) protein (231aa)
id=12557378 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
id=12557378 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_2968_3
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(3860..4372)
DNA (513bp) protein (171aa)
id=12557379 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557379 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_2968_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4391..5593)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLC3_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_2968_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5684..7462
DNA (1779bp) protein (593aa)
cyoB; Heme/copper-type cytochrome oxidase, subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Cytochrome-c oxidase id=5017086 bin=GWA2_Ignavibacteria_55_11 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
cyoB; Heme/copper-type cytochrome oxidase, subunit 1
13_1_40cm_scaffold_2968_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7568..8152
DNA (585bp) protein (195aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative Cytochrome c oxidase, subunit III id=2731964 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
cytochrome c oxidase subunit III
13_1_40cm_scaffold_2968_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8248..8589
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00035E4E1A
Caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Caa(3)-type oxidase, subunit IV
13_1_40cm_scaffold_2968_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8594..8794
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_2968_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8791..9066
DNA (276bp) protein (92aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_2968_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9063..9815
DNA (753bp) protein (251aa)
cyoA; Heme/copper-type cytochrome oxidase, subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00035C3883
cyoA; Heme/copper-type cytochrome oxidase, subunit 2
13_1_40cm_scaffold_2968_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9877..10338)
DNA (462bp) protein (154aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ornithine cyclodeaminase (EC:4.3.1.12) id=24407474 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ornithine cyclodeaminase (EC:4.3.1.12)
13_1_40cm_scaffold_2968_12
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10798..11712)
DNA (915bp) protein (305aa)
Histone deacetylase n=1 Tax=Thauera sp. 63 RepID=N6XM42_9RHOO
Histone deacetylase {ECO:0000313|EMBL:ENO80420.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
histone deacetylase
13_1_40cm_scaffold_2968_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11841..12860
DNA (1020bp) protein (340aa)
proline racemase (EC:5.1.1.4); K01777 proline racemase [EC:5.1.1.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
proline racemase n=1 Tax=Brevibacillus brevis RepID=UPI00034AE0B5
hypothetical protein
13_1_40cm_scaffold_2968_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12892..14661)
DNA (1770bp) protein (590aa)
Gamma-glutamyltranspeptidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDJ7_SINAD
gamma-glutamyltranspeptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
gamma-glutamyltranspeptidase
13_1_40cm_scaffold_2968_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14658..14981)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A63AE
iron donor protein CyaY; K06202 CyaY protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_40cm_scaffold_2968_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15161..16090)
DNA (930bp) protein (310aa)
von Willebrand factor type A domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
von Willebrand factor, type A id=12557382 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_2968_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16327..17082
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI00037BF968
iron permease FTR1 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
iron permease FTR1
13_1_40cm_scaffold_2968_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

17049..17522
DNA (474bp) protein (158aa)
OsmC-like protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220S1_RHOFD
hypothetical protein; K07397 putative redox protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
OsmC-like protein
13_1_40cm_scaffold_2968_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

17566..18603
DNA (1038bp) protein (346aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=12557387 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_2968_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

18650..19858
DNA (1209bp) protein (403aa)
Isopenicillin-N epimerase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENS1_RUNSL
class V aminotransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
isopenicillin-N epimerase
Displaying 20 items

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