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13_1_40cm_scaffold_3043

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3043_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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1..1662
DNA (1662bp) protein (554aa)
gluconate 2-dehydrogenase (EC:1.1.99.3) Tax=RBG_16_Acidobacteria_70_10_curated
gluconate 2-dehydrogenase (EC:1.1.99.3) id=12554830 bin=CNBR_ACIDO species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GMC oxidoreductase
13_1_40cm_scaffold_3043_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1727..2335
DNA (609bp) protein (203aa)
Tat pathway signal sequence domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Tat pathway signal sequence domain-containing protein id=12554829 bin=CNBR_ACIDO species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tat pathway signal sequence domain-containing protein
13_1_40cm_scaffold_3043_3
GWA2_OP11_nov_42_16, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

2768..4906
DNA (2139bp) protein (713aa)
Spermine synthase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C4S6_STRBB
Spermidine synthase-like protein {ECO:0000313|EMBL:KKS41338.1}; TaxID=1618441 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_42_16.;"
spermine synthase
13_1_40cm_scaffold_3043_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5067..5897
DNA (831bp) protein (277aa)
Hydroxypyruvate isomerase {ECO:0000313|EMBL:CDM66326.1}; EC=5.3.1.22 {ECO:0000313|EMBL:CDM66326.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="
Xylose isomerase domain protein TIM barrel n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PH9_SOLUE
Xylose isomerase domain-containing protein TIM barrel
13_1_40cm_scaffold_3043_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6009..6719
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFA8_RHOMR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF1080
13_1_40cm_scaffold_3043_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6822..8414
DNA (1593bp) protein (531aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0V9_9GAMM
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AHX13299.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
13_1_40cm_scaffold_3043_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8439..9806)
DNA (1368bp) protein (456aa)
cysteine synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Cystathionine beta-synthase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EGW8_9SPHI
cysteine synthase
13_1_40cm_scaffold_3043_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9915..10277
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0BZC3_ACAM1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_3043_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10290..10514
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFP5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99484.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
13_1_40cm_scaffold_3043_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10650..10937)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C308_NITHN
transcriptional regulator; K07743 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_3043_11
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

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comp(11015..11338)
DNA (324bp) protein (108aa)
id=12554850 Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
id=12554850 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_3043_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11425..12531)
DNA (1107bp) protein (369aa)
Putative dipeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A990_GEMAT
putative dipeptidase
Putative dipeptidase {ECO:0000313|EMBL:BAH39067.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27
13_1_40cm_scaffold_3043_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12539..13480)
DNA (942bp) protein (314aa)
UPI0003A04C7D related cluster n=1 Tax=unknown RepID=UPI0003A04C7D
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG88563.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_3043_14
uncultured gamma proteobacterium EB000_65A11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13477..13662)
DNA (186bp) protein (62aa)
Imidazolonepropionase and related amidohydrolases {ECO:0000313|EMBL:ADI19993.1}; TaxID=710972 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma
13_1_40cm_scaffold_3043_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13706..14128)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000368E092
Cupin 2 conserved barrel domain protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AHG93030.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_3043_16
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14362..15111)
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9C0_COLFT
ygfF; Short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEK62382.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Col
13_1_40cm_scaffold_3043_17
unknown

Not on your lists

comp(15104..15205)
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_scaffold_3043_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15202..15591)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94078.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
13_1_40cm_scaffold_3043_19
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15601..15837)
DNA (237bp) protein (79aa)
Membrane protein YeaQ n=2 Tax=Geobacter metallireducens RepID=Q39WC9_GEOMG
membrane protein YeaQ
Membrane protein YeaQ {ECO:0000313|EMBL:ABB31445.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metalliredu
13_1_40cm_scaffold_3043_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16060..16890)
DNA (831bp) protein (277aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDT3_RHOMR
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:AEN72453.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
13_1_40cm_scaffold_3043_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(17380..18891)
DNA (1512bp) protein (504aa)
tannase and feruloyl esterase; K09252 feruloyl esterase [EC:3.1.1.73] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Tannase and feruloyl esterase
Feruloyl esterase id=3979401 bin=GWF2_Bacteroidetes_42_66 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
13_1_40cm_scaffold_3043_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18900..19994)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SG7_SOLUE
permease
Permease {ECO:0000313|EMBL:AHG87967.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_3043_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(20182..21141)
DNA (960bp) protein (320aa)
putative glutamyl-tRNA synthetase; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative glutamyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9D8_GEMAT
putative glutamyl-tRNA synthetase
13_1_40cm_scaffold_3043_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

21299..22675
DNA (1377bp) protein (459aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024N0_SOLUE
Displaying 24 items

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