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13_1_40cm_scaffold_3137

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3137_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1..1089
DNA (1089bp) protein (363aa)
glutamate carboxypeptidase II (EC:3.4.17.21) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glutamate carboxypeptidase II (EC:3.4.17.21)
Glutamate carboxypeptidase II n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X553_ACISM
13_1_40cm_scaffold_3137_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1113..1541
DNA (429bp) protein (143aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_scaffold_3137_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1648..2397)
DNA (750bp) protein (250aa)
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rhomboid family protein id=12556676 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rhomboid family protein
13_1_40cm_scaffold_3137_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2456..4072)
DNA (1617bp) protein (539aa)
integral membrane protein MviN; K03980 virulence factor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
integral membrane protein MviN; K03980 virulence factor id=12556675 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
integral membrane protein MviN
13_1_40cm_scaffold_3137_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4300..4746)
DNA (447bp) protein (149aa)
hypothetical protein; K09117 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K09117 hypothetical protein id=12556674 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_3137_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4765..5505)
DNA (741bp) protein (247aa)
signal peptide protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000380B5BB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_scaffold_3137_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5566..6528)
DNA (963bp) protein (321aa)
nucleoside-diphosphate-sugar epimerase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
nucleoside-diphosphate-sugar epimerase id=12556656 bin=CNBR_ACIDO species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nucleoside-diphosphate-sugar epimerase
13_1_40cm_scaffold_3137_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6578..7636)
DNA (1059bp) protein (353aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) id=12556650 bin=CNBR_ACIDO species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
13_1_40cm_scaffold_3137_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7633..8697)
DNA (1065bp) protein (355aa)
putative nucleotide sugar epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative nucleotide sugar epimerase/dehydratase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9S9_CALAS
putative nucleotide sugar epimerase/dehydratase
13_1_40cm_scaffold_3137_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8694..9500)
DNA (807bp) protein (269aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
glycosyl transferase family protein id=12556649 bin=CNBR_ACIDO species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyl transferase family protein
13_1_40cm_scaffold_3137_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9536..10267)
DNA (732bp) protein (244aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.4.1.83) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] id=12556647 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
13_1_40cm_scaffold_3137_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10264..11124)
DNA (861bp) protein (287aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
family 2 glycosyl transferase id=12556645 bin=CNBR_ACIDO species=Thioalkalivibrio sp. AKL7 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
family 2 glycosyl transferase
13_1_40cm_scaffold_3137_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11131..12180)
DNA (1050bp) protein (350aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
group 1 glycosyl transferase id=12556643 bin=CNBR_ACIDO species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
group 1 glycosyl transferase
13_1_40cm_scaffold_3137_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12344..13393)
DNA (1050bp) protein (350aa)
Ribosome-binding ATPase YchF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILQ1_KORVE
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ychF; GTP-dependent nucleic acid-binding protein EngD
13_1_40cm_scaffold_3137_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13762..14202
DNA (441bp) protein (147aa)
putative MraZ protein; K03925 MraZ protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative MraZ protein; K03925 MraZ protein id=12556642 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MraZ protein
13_1_40cm_scaffold_3137_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14202..15104
DNA (903bp) protein (301aa)
S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
16S rRNA methyltransferase id=12556641 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_3137_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

15190..15576
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
id=12556640 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ftsL; cell division septum formation protein FtsL
13_1_40cm_scaffold_3137_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15685..17679
DNA (1995bp) protein (665aa)
peptidoglycan glycosyltransferase; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=12556639 bin=CNBR_ACIDO species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidoglycan glycosyltransferase
13_1_40cm_scaffold_3137_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

17676..19196
DNA (1521bp) protein (507aa)
MurE; UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=12556638 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13)
13_1_40cm_scaffold_3137_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19193..20638
DNA (1446bp) protein (482aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPLOWO2_12_FUL
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] id=12556637 bin=CNBR_ACIDO species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
13_1_40cm_scaffold_3137_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20638..21651
DNA (1014bp) protein (338aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=12556636 bin=CNBR_ACIDO species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
13_1_40cm_scaffold_3137_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

21665..23023
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9) id=12556635 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylmuramoylalanine--D-glutamate ligase
13_1_40cm_scaffold_3137_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23539..24639
DNA (1101bp) protein (367aa)
cell cycle protein; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cell cycle protein; K03588 cell division protein FtsW id=12556634 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell cycle protein
13_1_40cm_scaffold_3137_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

24661..25749
DNA (1089bp) protein (363aa)
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylgluco
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=12556633 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
13_1_40cm_scaffold_3137_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

26108..27505
DNA (1398bp) protein (466aa)
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=12556632 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylmuramate--L-alanine ligase
13_1_40cm_scaffold_3137_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

27502..28398
DNA (897bp) protein (299aa)
cell division septal protein-like; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division septal protein-like; K03589 cell division protein FtsQ id=12556631 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell division septal protein-like
13_1_40cm_scaffold_3137_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

28506..29744
DNA (1239bp) protein (413aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division protein FtsA; K03590 cell division protein FtsA id=12556630 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell division protein FtsA
13_1_40cm_scaffold_3137_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

29903..31315
DNA (1413bp) protein (471aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division protein FtsZ; K03531 cell division protein FtsZ id=12556629 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell division protein FtsZ
Displaying 28 items

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