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13_1_40cm_scaffold_3177

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3177_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1..450
DNA (450bp) protein (150aa)
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K07040 uncharacterized protein id=12555163 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_3177_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


463..645
DNA (183bp) protein (61aa)
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 id=12555164 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpmF; 50S ribosomal protein L32
13_1_40cm_scaffold_3177_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

741..1814
DNA (1074bp) protein (358aa)
glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
plsX; fatty acid/phospholipid synthesis protein, methyltransferase domain id=12555165 bin=CNBR_ACIDO species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycerol-3-phosphate acyltransferase PlsX
13_1_40cm_scaffold_3177_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1795..2772
DNA (978bp) protein (326aa)
ACP S-malonyltransferase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHS7_KORVE
ACP S-malonyltransferase
13_1_40cm_scaffold_3177_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2765..3505
DNA (741bp) protein (247aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=12555166 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
3-oxoacyl-[acyl-carrier protein] reductase
13_1_40cm_scaffold_3177_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3515..3757
DNA (243bp) protein (81aa)
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acpP; acyl carrier protein; K02078 acyl carrier protein id=12555167 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acpP; acyl carrier protein
13_1_40cm_scaffold_3177_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

3850..5097
DNA (1248bp) protein (416aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] id=12555168 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
3-oxoacyl-ACP synthase (EC:2.3.1.41)
13_1_40cm_scaffold_3177_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5393..6223
DNA (831bp) protein (277aa)
electron transfer flavoprotein beta-subunit; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
electron transfer flavoprotein beta-subunit; K03521 electron transfer flavoprotein beta subunit id=12556268 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
electron transfer flavoprotein subunit beta
13_1_40cm_scaffold_3177_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6204..7172
DNA (969bp) protein (323aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK99_KORVE
electron transfer flavoprotein, alpha subunit; K03522 electron transfer flavoprotein alpha subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
electron transfer flavoprotein subunit alpha
13_1_40cm_scaffold_3177_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7169..8821
DNA (1653bp) protein (551aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=12556274 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
electron-transferring-flavoprotein dehydrogenase
13_1_40cm_scaffold_3177_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8903..9589
DNA (687bp) protein (229aa)
hypothetical protein; K09778 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein; K09778 hypothetical protein id=12555169 bin=CNBR_ACIDO species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_3177_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

9680..10783
DNA (1104bp) protein (368aa)
peptidase M, neutral zinc metallopeptidase, zinc-binding site Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Tetratricopeptide TPR_2 repeat protein id=3350149 bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
13_1_40cm_scaffold_3177_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10955..12196)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI00037EE8DD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_3177_14
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(12375..13196)
DNA (822bp) protein (274aa)
ubiquinone biosynthesis protein n=1 Tax=Nocardiopsis halotolerans RepID=UPI000347D987
type 11 methyltransferase Tax=RBG_16_Planctomycetes_43_13_curated
type 11 methyltransferase
13_1_40cm_scaffold_3177_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13365..14396
DNA (1032bp) protein (344aa)
histone deacetylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
histone deacetylase id=12555172 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histone deacetylase family protein
13_1_40cm_scaffold_3177_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

14575..17553
DNA (2979bp) protein (993aa)
Putative Cna B-type protein n=1 Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NMD3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
TonB-dependent receptor
13_1_40cm_scaffold_3177_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

17655..18806
DNA (1152bp) protein (384aa)
serine/threonine protein kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Protein kinase/protein beta WD-40 repeat id=8266675 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
serine/threonine protein kinase
13_1_40cm_scaffold_3177_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18821..20122
DNA (1302bp) protein (434aa)
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VF3_SOLUE
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ86362.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
Displaying 18 items

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