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13_1_40cm_scaffold_3194

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3194_1
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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comp(129..569)
DNA (441bp) protein (147aa)
response regulator receiver protein Tax=RBG_16_Zixibacteria_50_21_curated
Response regulator receiver id=4779057 bin=GWA2_OP3_52_12 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
response regulator receiver
13_1_40cm_scaffold_3194_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(582..1448)
DNA (867bp) protein (289aa)
Bacteriophytochrome (Light-regulated signal transduction histidine kinase) n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KTP3_9SYNC
PAS domain S-box {ECO:0000313|EMBL:KCZ71445.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source=
PAS sensor signal transduction histidine kinase
13_1_40cm_scaffold_3194_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1472..3181)
DNA (1710bp) protein (570aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZYI5_METMM
response regulator receiver modulated diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
13_1_40cm_scaffold_3194_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(3356..5074)
DNA (1719bp) protein (573aa)
Conserved domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CZI8_MYXXD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_3194_5
unknown

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comp(5078..5770)
DNA (693bp) protein (231aa)

This feature has no annotations

13_1_40cm_scaffold_3194_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(5921..6442)
DNA (522bp) protein (174aa)
hypothetical protein; K07735 putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein; K07735 putative transcriptional regulator id=12557815 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_3194_7
unknown

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6640..7503
DNA (864bp) protein (288aa)

This feature has no annotations

13_1_40cm_scaffold_3194_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7587..8222)
DNA (636bp) protein (212aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDH7_ANADF
phage SPO1 DNA polymerase-like protein
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ABS26773.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Ana
13_1_40cm_scaffold_3194_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8191..9051)
DNA (861bp) protein (287aa)
4Fe-4S ferredoxin, iron-sulfur binding Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=14425901 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
4Fe-4S ferredoxin
13_1_40cm_scaffold_3194_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9168..11960)
DNA (2793bp) protein (931aa)
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3] id=12557817 bin=CNBR_ACIDO species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aconitate hydratase 1
Displaying 10 items

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