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13_1_40cm_scaffold_4091

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4091_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

3..863
-----------------
DNA (861bp)
protein (287aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4W6_CALAS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_scaffold_4091_2
unknown

Not on your lists

comp(737..1036)
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

13_1_40cm_scaffold_4091_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1185..2357
-----------------
DNA (1173bp)
protein (391aa)
Uncharacterized conserved protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF23_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_scaffold_4091_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2498..3517
-----------------
DNA (1020bp)
protein (340aa)
Aminopeptidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZM3_SOLUE
aminopeptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
aminopeptidase
13_1_40cm_scaffold_4091_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3602..4330)
-----------------
DNA (729bp)
protein (243aa)
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
Uncharacterized protein id=4018818 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
13_1_40cm_scaffold_4091_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

4588..5799
-----------------
DNA (1212bp)
protein (404aa)
Biotin carboxylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK10_CHLTF
biotin carboxylase
Biotin carboxylase {ECO:0000313|EMBL:AEP13177.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B)
13_1_40cm_scaffold_4091_7
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5873..6706
-----------------
DNA (834bp)
protein (278aa)
Putative esterase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BD84_MEISD
putative esterase
Putative esterase {ECO:0000313|EMBL:ADH63002.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542
13_1_40cm_scaffold_4091_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6922..7554)
-----------------
DNA (633bp)
protein (211aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
metW; Methionine biosynthesis protein MetW id=12555641 bin=CNBR_ACIDO species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_4091_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7618..8391)
-----------------
DNA (774bp)
protein (258aa)
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thiazole synthase
thiG; carboxythiazole phosphate tautomer synthase; K03149 thiamine biosynthesis ThiG id=12555642 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_4091_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8402..8608)
-----------------
DNA (207bp)
protein (69aa)
Thiazole synthase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TX52_TISMK
thiG; bifunctional sulfur carrier protein/thiazole synthase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thiG; bifunctional sulfur carrier protein/thiazole synthase
13_1_40cm_scaffold_4091_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8860..9666)
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative uncharacterized protein id=4946979 bin=GWC2_Nitrospirae-rel_56_14 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
13_1_40cm_scaffold_4091_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9684..11093)
-----------------
DNA (1410bp)
protein (470aa)
NAD(P) transhydrogenase subunit beta; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NAD(P) transhydrogenase, beta subunit; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] id=12554218 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD(P) transhydrogenase subunit beta
13_1_40cm_scaffold_4091_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11090..11416)
-----------------
DNA (327bp)
protein (109aa)
nicotinamide nucleotide transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] id=12554217 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nicotinamide nucleotide transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
nicotinamide nucleotide transhydrogenase subunit alpha
13_1_40cm_scaffold_4091_14
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11409..12578)
-----------------
DNA (1170bp)
protein (390aa)
NAD/NADP transhydrogenase alpha subunit Tax=RBG_13_Deltaproteobacteria_65_10_curated
NAD/NADP transhydrogenase subunit alpha id=12554216 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD/NADP transhydrogenase subunit alpha
13_1_40cm_scaffold_4091_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12727..13041
-----------------
DNA (315bp)
protein (105aa)
Oxidoreductase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XL57_SORCE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
oxidoreductase
13_1_40cm_scaffold_4091_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13168..13785
-----------------
DNA (618bp)
protein (206aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Uncharacterized protein id=14630410 bin=bin8_Chloro species=Arthrobacter gangotriensis genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
13_1_40cm_scaffold_4091_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13782..14324
-----------------
DNA (543bp)
protein (181aa)
RES domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
RES domain-containing protein id=14630409 bin=bin8_Chloro species=Patulibacter americanus genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
RES domain-containing protein
13_1_40cm_scaffold_4091_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

14600..16105
-----------------
DNA (1506bp)
protein (502aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00036F8536
glycosyl hydrolase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
glycosyl hydrolase family protein
13_1_40cm_scaffold_4091_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(16439..16639)
-----------------
DNA (201bp)
protein (67aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_scaffold_4091_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16748..17728)
-----------------
DNA (981bp)
protein (327aa)
glk; glucokinase; K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glucokinase; K00845 glucokinase [EC:2.7.1.2] id=12556748 bin=CNBR_ACIDO species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glucokinase (EC:2.7.1.2)
13_1_40cm_scaffold_4091_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

17861..19036
-----------------
DNA (1176bp)
protein (392aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TPR repeat-containing protein id=12556747 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_4091_22
RIFOXYC2_FULL_PER-ii_58_32_curated, PER-ii, Bacteria

Not on your lists

19049..19312
-----------------
DNA (264bp)
protein (88aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003662952
hypothetical protein
hypothetical protein Tax=RIFOXYC2_FULL_PER-ii_58_32_curated
13_1_40cm_scaffold_4091_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19688..20857)
-----------------
DNA (1170bp)
protein (390aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] id=12556746 bin=CNBR_ACIDO species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA/RNA helicase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DEAD/DEAH box helicase domain protein
13_1_40cm_scaffold_4091_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20990..21208)
-----------------
DNA (219bp)
protein (73aa)
translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
translation initiation factor IF-1 id=12556745 bin=CNBR_ACIDO species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
translation initiation factor IF-1
13_1_40cm_scaffold_4091_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(21246..23756)
-----------------
DNA (2511bp)
protein (837aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=14425647 bin=bin1_lowGC species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
AMP-dependent synthetase/ligase
13_1_40cm_scaffold_4091_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23814..24737
-----------------
DNA (924bp)
protein (308aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHK7_ANADE
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_4091_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(24749..25456)
-----------------
DNA (708bp)
protein (236aa)
endopeptidase Clp; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GLQ6_9CYAN
13_1_40cm_scaffold_4091_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25485..25952)
-----------------
DNA (468bp)
protein (156aa)
Calcium/proton exchanger n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CG4_METCA
cax-1; calcium/proton exchanger; K07300 Ca2+:H+ antiporter Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cax-1; calcium/proton exchanger
13_1_40cm_scaffold_4091_29
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25952..26503)
-----------------
DNA (552bp)
protein (184aa)
cation transporter n=1 Tax=Deinococcus aquatilis RepID=UPI00038135AC
cax-1; calcium/proton exchanger; K07300 Ca2+:H+ antiporter Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
CaCA family calcium/proton antiporter
13_1_40cm_scaffold_4091_30
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(26668..26880)
-----------------
DNA (213bp)
protein (71aa)
Mandelate racemase/muconate lactonizing enzyme,N-terminal domain protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying items 1-30 of 45 in total

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