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13_1_40cm_scaffold_4261

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4261_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..765)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QKZ9_9DELT
macrolide transporter ATP-binding/permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_scaffold_4261_2
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(923..1297)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST7_KORVE
Glyoxalase {ECO:0000313|EMBL:KGM55578.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;
hypothetical protein
13_1_40cm_scaffold_4261_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1440..1913
DNA (474bp) protein (158aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Thioredoxin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJW5_9BACT
Thioredoxin
13_1_40cm_scaffold_4261_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2031..3656
DNA (1626bp) protein (542aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:CDM64699.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CDM64699.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdi
Amidotransferase-related protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RWP6_9DELT
amidase
13_1_40cm_scaffold_4261_5
unknown

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3954..4046
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_scaffold_4261_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4063..4734)
DNA (672bp) protein (224aa)
hypothetical protein; K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative uncharacterized protein id=1870896 bin=GWB2_Proteobacteria_55_19 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_4261_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

4893..5336
DNA (444bp) protein (148aa)
GCN5-related N-acetyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E8_SOLUE
N-acetyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
N-acetyltransferase
13_1_40cm_scaffold_4261_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5506..5880
DNA (375bp) protein (125aa)
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
4Fe-4S ferredoxin id=12555456 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
4Fe-4S ferredoxin
13_1_40cm_scaffold_4261_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5971..6720
DNA (750bp) protein (250aa)
exodeoxyribonuclease III Xth (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
exodeoxyribonuclease III Xth (EC:3.1.11.2)
Exodeoxyribonuclease III Xth n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB53_ANASK
13_1_40cm_scaffold_4261_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

6843..8069
DNA (1227bp) protein (409aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
aspartokinase (EC:2.7.2.4)
aspartate kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744EE8
13_1_40cm_scaffold_4261_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8217..9449
DNA (1233bp) protein (411aa)
peptidase T (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidase T (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4] id=24533235 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase T
13_1_40cm_scaffold_4261_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9572..10189)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA96_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_scaffold_4261_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10503..11507)
DNA (1005bp) protein (335aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_4261_14
unknown

Not on your lists

11550..11624
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 14 items

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