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13_1_40cm_scaffold_4671

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4671_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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433..2223
DNA (1791bp) protein (597aa)
FtsH peptidase; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ftsH; ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YLV5_9BACT
13_1_40cm_scaffold_4671_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2273..2896
DNA (624bp) protein (208aa)
DNA polymerase, beta domain protein region n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1Z0_DESAP
DNA polymerase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_4671_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2893..3306
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIA5_ROSCS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_4671_4
unknown

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3501..3905
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_scaffold_4671_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3928..4923)
DNA (996bp) protein (332aa)
id=12556705 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
id=12556705 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_4671_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4920..6845)
DNA (1926bp) protein (642aa)
peptidase M1 membrane alanine aminopeptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
aminopeptidase N id=12556703 bin=CNBR_ACIDO species=Rudanella lutea genus=Rudanella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M1 membrane alanine aminopeptidase
13_1_40cm_scaffold_4671_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6845..7831)
DNA (987bp) protein (329aa)
Methyltransferase FkbM n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAC5_NOVAD
methyltransferase FkbM
Methyltransferase FkbM {ECO:0000313|EMBL:ABD25198.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
13_1_40cm_scaffold_4671_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7857..8861
DNA (1005bp) protein (335aa)
dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Dihydrodipicolinate reductase id=3364370 bin=GWF2_Ignavibacteria_35_20 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
dihydrodipicolinate reductase
13_1_40cm_scaffold_4671_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9358..9705
DNA (348bp) protein (116aa)
Transcriptional regulator, PadR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Z1_SOLUE
PadR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PadR family transcriptional regulator
13_1_40cm_scaffold_4671_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11031..12386
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CC200
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84756.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_scaffold_4671_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12507..13391
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKN6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM24528.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="M
hypothetical protein
13_1_40cm_scaffold_4671_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

13513..13977
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDD6_SINAD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_40cm_scaffold_4671_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14066..15274)
DNA (1209bp) protein (403aa)
molybdenum cofactor biosynthesis protein MoeA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
molybdenum cofactor biosynthesis protein MoeA id=12557430 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
molybdenum cofactor synthesis domain protein
13_1_40cm_scaffold_4671_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15473..15976)
DNA (504bp) protein (168aa)
moaB; molybdenum cofactor biosynthesis protein B; K03638 molybdenum cofactor biosynthesis protein B Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Molybdenum cofactor biosynthesis protein B id=2732488 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
moaB; molybdenum cofactor biosynthesis protein B
13_1_40cm_scaffold_4671_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

16111..17943
DNA (1833bp) protein (611aa)
glycoside hydrolase family protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Beta-lactamase id=8267314 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
beta-lactamase
13_1_40cm_scaffold_4671_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

17967..18788
DNA (822bp) protein (274aa)
DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ethanolamine utilization protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003771F6E
DNA polymerase III subunit epsilon
13_1_40cm_scaffold_4671_trna_1
unknown

Not on your lists

18813..18886
DNA (74bp)
transferRNA
13_1_40cm_scaffold_4671_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(18985..19335)
DNA (351bp) protein (117aa)
integrase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 18 items

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