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13_1_40cm_scaffold_4876

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4876_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3..926)
-----------------
DNA (924bp)
protein (308aa)
id=12554635 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
id=12554635 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_4876_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1648..1827)
-----------------
DNA (180bp)
protein (60aa)
Peptidase S9, prolyl oligopeptidase active site domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VD8_SOLUE
peptidase S9 prolyl oligopeptidase
Peptidase S9, prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ABJ86377.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacter
13_1_40cm_scaffold_4876_3

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comp(1824..2327)
-----------------
DNA (504bp)
protein (168aa)
tolB; peptidase S9 prolyl oligopeptidase active site domain protein (EC:3.4.19.1)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036BCC8E
Uncharacterized protein {ECO:0000313|EMBL:KKN25671.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_scaffold_4876_4
unknown

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2862..3557
-----------------
DNA (696bp)
protein (232aa)

This feature has no annotations

13_1_40cm_scaffold_4876_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(3586..4089)
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=12554262 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_4876_6
unknown

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4618..5049
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

13_1_40cm_scaffold_4876_7
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5215..6255
-----------------
DNA (1041bp)
protein (347aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55)
Putative 4,5-dihydroxyphthalate decarboxylase n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJ85_9SPHN
Putative 4,5-dihydroxyphthalate decarboxylase {ECO:0000313|EMBL:BAF03457.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
13_1_40cm_scaffold_4876_8
unknown

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6252..6497
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_4876_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6674..7267)
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_4876_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7279..8760)
-----------------
DNA (1482bp)
protein (494aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=12554668 bin=CNBR_ACIDO species=Rhodopirellula europaea genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
13_1_40cm_scaffold_4876_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

9681..10142
-----------------
DNA (462bp)
protein (154aa)
Lipoprotein NlpI, contains TPR repeats n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z1S0_BELBD
lipoprotein NlpI, contains TPR repeats Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
lipoprotein NlpI, contains TPR repeats
13_1_40cm_scaffold_4876_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10211..12388)
-----------------
DNA (2178bp)
protein (726aa)
Glutamine synthetase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DK74_SINAD
glutamine synthetase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
glutamine synthetase
13_1_40cm_scaffold_4876_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12639..14057
-----------------
DNA (1419bp)
protein (473aa)
L-glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Glutamine synthetase, type I n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAR3_9PLAN
glutamine synthetase, type I
13_1_40cm_scaffold_4876_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14045..15979)
-----------------
DNA (1935bp)
protein (645aa)
NUDIX hydrolase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHC1_RHOM4
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
NUDIX hydrolase
13_1_40cm_scaffold_4876_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15999..16253
-----------------
DNA (255bp)
protein (85aa)
alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
peroxiredoxin id=12555817 bin=CNBR_ACIDO species=Pusillimonas noertemannii genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peroxiredoxin
Displaying 15 items

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