ggKbase home page

13_1_40cm_scaffold_490

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_490_1
unknown

Not on your lists

3..188
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_scaffold_490_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(142..1359)
DNA (1218bp) protein (406aa)
UniRef90_D6TBK6 Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBK6_9CHLR id=1245705 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
2-oxoacid dehydrogenases acyltransferase family protein
13_1_40cm_scaffold_490_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1529..2776)
DNA (1248bp) protein (416aa)
peptidase M24 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ace:Acel_1043 peptidase M24 id=1245704 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
peptidase M24
13_1_40cm_scaffold_490_4
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

3259..3588
DNA (330bp) protein (110aa)
id=4424744 Tax=RBG_16_Armatimonadetes_58_9_curated
id=4424744 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_490_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3976..4932)
DNA (957bp) protein (319aa)
pyruvate dehydrogenase E1 component alpha subunit; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
pyruvate dehydrogenase E1 component alpha subunit; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=14631807 bin=bin9_gal15 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
pyruvate dehydrogenase E1 component alpha subunit
13_1_40cm_scaffold_490_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4929..5810)
DNA (882bp) protein (294aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
2-hydroxy-3-oxopropionate reductase id=2040898 bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_490_7
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5930..6817
DNA (888bp) protein (296aa)
6-chlorohydroxyquinol-1,2-dioxygenase n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031E8973
6-chlorohydroxyquinol-1,2-dioxygenase
6-chlorohydroxyquinol-1,2-dioxygenase {ECO:0000313|EMBL:KIF42747.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU
13_1_40cm_scaffold_490_8
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6877..7779
DNA (903bp) protein (301aa)
cupin n=1 Tax=Streptomyces chartreusis RepID=UPI000262E4D1
Cupin {ECO:0000313|EMBL:KKD08790.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein
13_1_40cm_scaffold_490_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7782..9347
DNA (1566bp) protein (522aa)
4-hydroxyphenylacetate 3-hydroxylase; K00483 4-hydroxyphenylacetate-3-monooxygenase large chain [EC:1.14.14.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWE2_ROSS1
4-hydroxyphenylacetate 3-hydroxylase
13_1_40cm_scaffold_490_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9386..10276
DNA (891bp) protein (297aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_490_11
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10431..10769)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A5T6_9PROT
Uncharacterized protein Tax=RBG_16_Betaproteobacteria_66_20_curated
13_1_40cm_scaffold_490_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10769..11188)
DNA (420bp) protein (140aa)
Cupin domain-containing protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A6Q6_9PROT
Cupin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_490_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11230..12087)
DNA (858bp) protein (286aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_490_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12084..13196)
DNA (1113bp) protein (371aa)
cyclase n=1 Tax=Burkholderia bryophila RepID=UPI000363BA32
Zn-dependent hydrolases Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Zn-dependent hydrolase
13_1_40cm_scaffold_490_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13447..14481)
DNA (1035bp) protein (345aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_490_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14491..17895)
DNA (3405bp) protein (1135aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A074B
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_490_17
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17944..18705)
DNA (762bp) protein (254aa)
Transcriptional regulator n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZIX1_TERRK
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFL89189.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391
13_1_40cm_scaffold_490_18
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19021..20784)
DNA (1764bp) protein (588aa)
carboxylesterase type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-] Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036E6EA1
carboxylesterase
13_1_40cm_scaffold_490_19
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20860..23280
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1H5_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG94759.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
13_1_40cm_scaffold_490_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23280..24524
DNA (1245bp) protein (415aa)
BNR repeat protein n=1 Tax=Roseovarius sp. 217 RepID=A3W7V5_9RHOB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_490_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

24675..26072
DNA (1398bp) protein (466aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026N0_SOLUE
alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_scaffold_490_22
unknown

Not on your lists

26076..26432
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_scaffold_490_23
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26439..26699)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE89_GEMAT
hypothetical protein
Metal-binding protein {ECO:0000313|EMBL:KIF15909.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
13_1_40cm_scaffold_490_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

26747..26950
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLL4_BLASD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_490_25
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

26951..27220
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9F7_ANAD2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_scaffold_490_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(27333..28775)
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VJ1_SOLUE
redoxin domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
thiol-disulfide isomerase
13_1_40cm_scaffold_490_27
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(28876..29238)
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_490_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29420..30475)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW49_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_490_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(30564..31232)
DNA (669bp) protein (223aa)
Peptidase M15A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW48_9BACT
Peptidase M15A
Peptidase M15A {ECO:0000313|EMBL:AHG91208.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_490_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31229..32098)
DNA (870bp) protein (290aa)
Beta-lactamase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW47_9BACT
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AHG91207.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 46 in total

View Taxonomy