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13_1_40cm_scaffold_496

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_496_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..1695)
DNA (1695bp) protein (565aa)
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
K(+)-insensitive pyrophosphate-energized proton pump id=3585892 bin=GWF2_Methylomirabilis_70_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hppA; membrane-bound proton-translocating pyrophosphatase
13_1_40cm_scaffold_496_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1719..2303)
DNA (585bp) protein (195aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=12556589 bin=CNBR_ACIDO species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_496_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(2309..3112)
DNA (804bp) protein (268aa)
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Undecaprenyl-diphosphatase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I422_RHOVT
undecaprenol kinase
13_1_40cm_scaffold_496_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3184..4194)
DNA (1011bp) protein (337aa)
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF id=12556591 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein-export membrane protein SecF
13_1_40cm_scaffold_496_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4200..5789)
DNA (1590bp) protein (530aa)
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD id=12556592 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein-export membrane protein SecD
13_1_40cm_scaffold_496_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5795..6133)
DNA (339bp) protein (113aa)
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=12556593 bin=CNBR_ACIDO species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
preprotein translocase subunit YajC
13_1_40cm_scaffold_496_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6130..7287)
DNA (1158bp) protein (386aa)
tgt-2; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
tgt-2; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=12556594 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tgt-2; queuine tRNA-ribosyltransferase
13_1_40cm_scaffold_496_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

7408..8583
DNA (1176bp) protein (392aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=12556595 bin=CNBR_ACIDO species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
D-alanine--D-alanine ligase (EC:6.3.2.4)
13_1_40cm_scaffold_496_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8580..9494
DNA (915bp) protein (305aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Uncharacterized protein id=4764694 bin=GWC2_Syntrophus__56_31 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_496_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9912..11984)
DNA (2073bp) protein (691aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
peptidyl-prolyl cis-trans isomerase id=12556596 bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cyclophilin type peptidyl-prolyl cis-trans isomerase
13_1_40cm_scaffold_496_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12098..13279)
DNA (1182bp) protein (394aa)
O-succinylbenzoate synthase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SF69_9BACT
O-succinylbenzoate synthase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
O-succinylbenzoate synthase
13_1_40cm_scaffold_496_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13305..13946
DNA (642bp) protein (214aa)
Deoxynucleoside kinase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Deoxynucleoside kinase family protein id=12556597 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Deoxynucleoside kinase family protein
13_1_40cm_scaffold_496_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13961..14881
DNA (921bp) protein (307aa)
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] id=12556598 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
13_1_40cm_scaffold_496_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14882..15775
DNA (894bp) protein (298aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Dihydrofolate synthase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PLT4_9DELT
folylpolyglutamate synthase
Displaying 14 items

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