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13_1_40cm_scaffold_578

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_578_1
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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2..391
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD90_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_40cm_scaffold_578_2
unknown

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comp(555..1679)
DNA (1125bp) protein (375aa)

This feature has no annotations

13_1_40cm_scaffold_578_3
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1728..2447
DNA (720bp) protein (240aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:KCV81098.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source=
13_1_40cm_scaffold_578_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2453..3403
DNA (951bp) protein (317aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Pseudomonas sp. GM33 RepID=J2R5R3_9PSED
serA; putative phosphoglycerate dehydrogenase (PGDH), serA-like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
lactate dehydrogenase
13_1_40cm_scaffold_578_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3469..5895)
DNA (2427bp) protein (809aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003786501
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_scaffold_578_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6176..7765)
DNA (1590bp) protein (530aa)
Benzoate-CoA ligase family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMS4_9FIRM
benzoate-CoA ligase family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
benzoate-CoA ligase family
13_1_40cm_scaffold_578_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7973..8767
DNA (795bp) protein (265aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] id=12555457 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lipA; lipoyl synthase (EC:2.8.1.8)
13_1_40cm_scaffold_578_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

8972..10330
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020C4_SOLUE
thiol-disulfide isomerase or thioredoxin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
thiol-disulfide isomerase or thioredoxin
13_1_40cm_scaffold_578_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10432..11349
DNA (918bp) protein (306aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_578_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11437..11976)
DNA (540bp) protein (180aa)
carbon monoxide dehydrogenase subunit G; K09386 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Carbon monoxide dehydrogenase subunit G id=2537556 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
carbon monoxide dehydrogenase
13_1_40cm_scaffold_578_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11945..12781)
DNA (837bp) protein (279aa)
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI0003744CF2
molybdopterin dehydrogenase protein
13_1_40cm_scaffold_578_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12859..15216)
DNA (2358bp) protein (786aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFU3_9BACT
13_1_40cm_scaffold_578_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(15194..15679)
DNA (486bp) protein (162aa)
[2Fe-2S] binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Small chain CO dehydrogenase n=1 Tax=uncultured bacterium RepID=Q84CX4_9BACT
[2Fe-2S] binding domain-containing protein
13_1_40cm_scaffold_578_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15870..17576)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LW83_ACIC1
protein tolB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_578_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17790..19334)
DNA (1545bp) protein (515aa)
Nitrogenase (Molybdenum-iron)-specific transcriptional regulator NifA n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PL86_9DELT
Nif-specific regulatory protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Nif-specific regulatory protein
13_1_40cm_scaffold_578_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

19557..20165
DNA (609bp) protein (203aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_scaffold_578_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

20178..20372
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_scaffold_578_18
unknown

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20608..21234
DNA (627bp) protein (209aa)

This feature has no annotations

13_1_40cm_scaffold_578_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21318..22730)
DNA (1413bp) protein (471aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=14426108 bin=bin1_lowGC species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
dihydrolipoamide dehydrogenase
Displaying 19 items

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