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13_1_40cm_scaffold_583

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_583_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2..1387
DNA (1386bp) protein (462aa)
Xanthine dehydrogenase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QC05_9DELT
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
dehydrogenase
13_1_40cm_scaffold_583_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1571..2482
DNA (912bp) protein (304aa)
FAD-binding molybdopterin dehydrogenase; K11178 xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QC04_9DELT
FAD-binding molybdopterin dehydrogenase
13_1_40cm_scaffold_583_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2544..2816)
DNA (273bp) protein (91aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNV9_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF58425.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3
transcriptional regulator, LuxR family
13_1_40cm_scaffold_583_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3200..4240)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YP33_9ALTE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_583_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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4459..5085
DNA (627bp) protein (209aa)
Peptidase M28 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C866_SPHTD
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ACZ40009.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaero
13_1_40cm_scaffold_583_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5359..6369
DNA (1011bp) protein (337aa)
Putative S9C family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAA0_GEMAT
putative S9C family peptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
putative S9C family peptidase
13_1_40cm_scaffold_583_7
unknown

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comp(6387..6593)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_583_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6795..8540)
DNA (1746bp) protein (582aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035DD4AD
13_1_40cm_scaffold_583_9
Serendipita vermifera, Serendipita, Sebacinales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

8989..9399
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) RepID=A7EJN4_SCLS1
Uncharacterized protein {ECO:0000313|EMBL:KIM22787.1}; TaxID=933852 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Sebacinales; Sebacinales group B; Serendipita.;"
hypothetical protein
13_1_40cm_scaffold_583_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9761..10981)
DNA (1221bp) protein (407aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
cyclophilin type peptidyl-prolyl cis-trans isomerase id=12554692 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative cyclophilin type peptidyl-prolyl cis-trans isomerase
13_1_40cm_scaffold_583_11
unknown

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comp(11073..11624)
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_scaffold_583_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12011..12793
DNA (783bp) protein (261aa)
Molybdate ABC transporter periplasmic molybdate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IC50_9BRAD
hypothetical protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_scaffold_583_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12886..13947)
DNA (1062bp) protein (354aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Monooxygenase, FAD-binding protein id=2075993 bin=GWD2_Deltaproteobacteria_55_8 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
monooxygenase
13_1_40cm_scaffold_583_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13964..16096
DNA (2133bp) protein (711aa)
AMP-dependent synthetase and ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAS2_CONWI
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADB51235.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Cone
13_1_40cm_scaffold_583_15
unknown

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comp(16520..17440)
DNA (921bp) protein (307aa)

This feature has no annotations

13_1_40cm_scaffold_583_16
unknown

Not on your lists

comp(17437..17793)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_scaffold_583_17
unknown

Not on your lists

17894..18223
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_scaffold_583_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

18732..19214
DNA (483bp) protein (161aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
13_1_40cm_scaffold_583_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19603..20811
DNA (1209bp) protein (403aa)
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=12555145 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ATPase AAA
13_1_40cm_scaffold_583_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(21875..24202)
DNA (2328bp) protein (776aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHM3_KORVE
ABC efflux pump, inner membrane subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
efflux ABC transporter inner membrane protein
Displaying 20 items

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