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13_1_40cm_scaffold_6046

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6046_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..440)
DNA (438bp) protein (146aa)
Putative DinB family protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1F2_9ZZZZ
DinB family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DinB family protein
13_1_40cm_scaffold_6046_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(638..2191)
DNA (1554bp) protein (518aa)
aldehyde dehydrogenase (acceptor); K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Aldehyde dehydrogenase (Acceptor) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG3_KORVE
Aldehyde Dehydrogenase
13_1_40cm_scaffold_6046_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

2248..3378
DNA (1131bp) protein (377aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VV8_SOLUE
succinylglutamate desuccinylase/aspartoacylase; K06987 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Succinylglutamate desuccinylase/aspartoacylase
13_1_40cm_scaffold_6046_4
R_WOR_2_67_20, WOR-2, Bacteria

Not on your lists

3400..4239
DNA (840bp) protein (280aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367BB3A
rhodanese domain-containing protein
13_1_40cm_scaffold_6046_5
R_WOR_2_67_20, WOR-2, Bacteria

Not on your lists

4362..4583
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000377A73A
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
13_1_40cm_scaffold_6046_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4680..5513
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLI4_MOOTA
hypothetical protein; K07090 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_scaffold_6046_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5602..5910
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Lactobacillus florum 2F RepID=K5EN39_9LACO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_scaffold_6046_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6032..6553)
DNA (522bp) protein (174aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_6046_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6733..7563)
DNA (831bp) protein (277aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2ZSG2_9CAUL
Putative transcriptional regulator {ECO:0000313|EMBL:EJL21694.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacte
DNA-binding protein
13_1_40cm_scaffold_6046_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7733..10474)
DNA (2742bp) protein (914aa)
nitrate reductase (EC:1.7.99.4)
Nitrate reductase n=2 Tax=Chloroflexus RepID=A9WIA3_CHLAA
molydopterin dinucleotide-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_6046_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10526..12106)
DNA (1581bp) protein (527aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4B5_THERP
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
4Fe-4S ferredoxin
13_1_40cm_scaffold_6046_12
unknown

Not on your lists

comp(12204..12392)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_scaffold_6046_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12622..15981)
DNA (3360bp) protein (1120aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12557236 bin=CNBR_ACIDO species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative type II DNA modification enzyme
13_1_40cm_scaffold_6046_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15984..17441)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00036DC499
ERCC4-like helicases Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
helicase
Displaying 14 items

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