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13_1_40cm_scaffold_6817

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6817_1
unknown

Not on your lists

comp(3..731)
DNA (729bp) protein (243aa)

This feature has no annotations

13_1_40cm_scaffold_6817_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(734..1534)
DNA (801bp) protein (267aa)
id=12555532 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_6817_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1546..2664)
DNA (1119bp) protein (373aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_6817_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2698..3318)
DNA (621bp) protein (207aa)
id=12555534 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12555534 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_6817_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3287..3886)
DNA (600bp) protein (200aa)
pilin assembly protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Pillin, putative id=2244570 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
13_1_40cm_scaffold_6817_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4054..5313)
DNA (1260bp) protein (420aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRA8_KORVE
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PAS/PAC sensor signal transduction histidine kinase
13_1_40cm_scaffold_6817_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5310..5579)
DNA (270bp) protein (90aa)
sulfatase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_6817_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5762..7258)
DNA (1497bp) protein (499aa)
Sulfatase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P212_9BACT
sulfatase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
sulfatase
13_1_40cm_scaffold_6817_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7248..7805)
DNA (558bp) protein (186aa)
sulfatase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_6817_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8074..8577)
DNA (504bp) protein (168aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_6817_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8574..9350)
DNA (777bp) protein (259aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035D0F3A
peptidase A24A domain-containing protein
13_1_40cm_scaffold_6817_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9347..10288)
DNA (942bp) protein (314aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=12555536 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_6817_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10296..11102)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PLS6_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative ABC transporter permease
13_1_40cm_scaffold_6817_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11102..11494)
DNA (393bp) protein (131aa)
ABC transporter ATPase (EC:3.6.3.-); K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00037D9DF2
13_1_40cm_scaffold_6817_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11488..12006)
DNA (519bp) protein (173aa)
ABC transporter ATP-binding protein n=1 Tax=sediment metagenome RepID=D9PLS7_9ZZZZ
multidrug ABC transporter ATPase; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC transporter ATPase
13_1_40cm_scaffold_6817_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12144..13346)
DNA (1203bp) protein (401aa)
Membrane protein containing Vitamin K epoxide reductase domain n=1 Tax=sediment metagenome RepID=D9PJ66_9ZZZZ
vitamin K epoxide reductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
vitamin K epoxide reductase
13_1_40cm_scaffold_6817_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13449..13982)
DNA (534bp) protein (178aa)
Membrane or secreted protein containing Prepilin-type cleavage/methylation, N-terminal domain n=1 Tax=sediment metagenome RepID=D9PMY9_9ZZZZ
fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
fimbrial protein pilin
13_1_40cm_scaffold_6817_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14109..14390)
DNA (282bp) protein (94aa)
Membrane or secreted protein containing Prepilin-type cleavage/methylation, N-terminal domain n=1 Tax=sediment metagenome RepID=D9PMY9_9ZZZZ
fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 18 items

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