ggKbase home page

13_1_40cm_scaffold_707

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_707_1
unknown

Not on your lists

1..99
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_scaffold_707_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(103..2643)
DNA (2541bp) protein (847aa)
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis; K02004 putative ABC transport system permease protein id=12554210 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis
13_1_40cm_scaffold_707_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2640..3308)
DNA (669bp) protein (223aa)
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein id=12554211 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
antimicrobial peptide ABC transporter ATPase
13_1_40cm_scaffold_707_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3305..4039)
DNA (735bp) protein (245aa)
lysophospholipase L1-like esterase (EC:3.1.1.2); K10804 acyl-CoA thioesterase I [EC:3.1.2.- 3.1.1.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
lysophospholipase L1-like esterase (EC:3.1.1.2)
Lysophospholipase L1-like esterase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ66_CHLTF
13_1_40cm_scaffold_707_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

4318..4575
DNA (258bp) protein (86aa)
Xaa-Pro aminopeptidase family enzyme n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KIN6_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_scaffold_707_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4625..4864)
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_707_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5194..6909
DNA (1716bp) protein (572aa)
bifunctional transaldolase/phosoglucose isomerase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Bifunctional transaldolase / phosphoglucose isomerase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SG43_9BACT
transaldolase
13_1_40cm_scaffold_707_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6996..7898
DNA (903bp) protein (301aa)
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase (Decarboxylating) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFB1_9BACT
13_1_40cm_scaffold_707_9
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7891..9456
DNA (1566bp) protein (522aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RBG_16_Betaproteobacteria_58_11_curated
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A445_METMM
13_1_40cm_scaffold_707_10
unknown

Not on your lists

9441..10445
DNA (1005bp) protein (335aa)

This feature has no annotations

13_1_40cm_scaffold_707_11
unknown

Not on your lists

comp(10552..11034)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_scaffold_707_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11136..11483
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDR6_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_707_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11521..14454
DNA (2934bp) protein (978aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK14_RHOMR
Fis family sigma-54 specific transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sigma54 specific Fis family transcriptional regulator
13_1_40cm_scaffold_707_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14653..15063
DNA (411bp) protein (137aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_707_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15131..16051)
DNA (921bp) protein (307aa)
Beta-lactamase domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIQ1_RHOM4
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
beta-lactamase domain-containing protein
13_1_40cm_scaffold_707_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(16059..16670)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037A0A7F
Uncharacterized protein {ECO:0000313|EMBL:EFH86532.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
PA-phosphatase-like phosphoesterase
13_1_40cm_scaffold_707_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(16724..18457)
DNA (1734bp) protein (578aa)
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
N-acyl-D-amino-acid deacylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INE0_KORVE
N-acyl-D-amino-acid deacylase
13_1_40cm_scaffold_707_18
unknown

Not on your lists

18557..19150
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_40cm_scaffold_707_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(19098..20825)
DNA (1728bp) protein (576aa)
Putative metal-dependent hydrolase with the TIM-barrel fold protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A790_9GAMM
amidohydrolase; K07047 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Amidohydrolase 3
13_1_40cm_scaffold_707_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

21603..21815
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_707_21
unknown

Not on your lists

comp(22238..22474)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_scaffold_707_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23017..24414
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000367B4B8
beta-lactamase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
beta-lactamase
13_1_40cm_scaffold_707_23
unknown

Not on your lists

24467..24679
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_707_24
unknown

Not on your lists

24730..25767
DNA (1038bp) protein (346aa)

This feature has no annotations

13_1_40cm_scaffold_707_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25764..26594
DNA (831bp) protein (277aa)
Putative von Willebrand factor type A domain protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G6_9ZZZZ
Putative von Willebrand factor type A domain protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Mg-chelatase subunit ChlD
13_1_40cm_scaffold_707_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26619..27776)
DNA (1158bp) protein (386aa)
Phosphonoacetate hydrolase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5Q0_VARPE
phosphonoacetate hydrolase
Phosphonoacetate hydrolase {ECO:0000313|EMBL:ADU35947.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxu
13_1_40cm_scaffold_707_27
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(27773..28753)
DNA (981bp) protein (327aa)
Putative hydrolase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I687_CALAS
putative hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative hydrolase
13_1_40cm_scaffold_707_28
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

28782..30059
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037BBA6F
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
permease
Displaying 28 items

View Taxonomy