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13_1_40cm_scaffold_720

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_720_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1..2118)
DNA (2118bp) protein (706aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=12555521 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polynucleotide phosphorylase
13_1_40cm_scaffold_720_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(2202..2471)
DNA (270bp) protein (90aa)
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=12555520 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsO; 30S ribosomal protein S15
13_1_40cm_scaffold_720_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2560..3558)
DNA (999bp) protein (333aa)
tRNA pseudouridine synthase b; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
tRNA pseudouridine synthase B n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6WFP0_9ACTO
hypothetical protein
13_1_40cm_scaffold_720_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3570..4592)
DNA (1023bp) protein (341aa)
exopolyphosphatase-like protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
exopolyphosphatase-like protein; K06881 phosphoesterase RecJ domain-containing protein id=12555518 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
exopolyphosphatase-like protein
13_1_40cm_scaffold_720_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4573..5034)
DNA (462bp) protein (154aa)
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A id=12555517 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rbfA; ribosome-binding factor A
13_1_40cm_scaffold_720_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5124..5405)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W30_SOLUE
hypothetical protein; K09764 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_scaffold_720_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5496..8330)
DNA (2835bp) protein (945aa)
translation initiation factor 2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
translation initiation factor 2; K02519 translation initiation factor IF-2 id=12555516 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
translation initiation factor 2
13_1_40cm_scaffold_720_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8647..9663)
DNA (1017bp) protein (339aa)
nusA; transcription termination factor NusA; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
NusA antitermination factor; K02600 N utilization substance protein A id=12555515 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NusA antitermination factor
13_1_40cm_scaffold_720_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9664..10143)
DNA (480bp) protein (160aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein; K09748 ribosome maturation factor RimP id=12555514 bin=CNBR_ACIDO species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_720_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10216..11661)
DNA (1446bp) protein (482aa)
30S ribosomal protein S12P methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
30S ribosomal protein S12P methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] id=12555513 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S12P methylthiotransferase
13_1_40cm_scaffold_720_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11784..13019)
DNA (1236bp) protein (412aa)
asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] id=12555512 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
asparaginyl-tRNA synthetase
13_1_40cm_scaffold_720_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13001..13726)
DNA (726bp) protein (242aa)
xylose isomerase-like TIM barrel Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_720_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13832..14872)
DNA (1041bp) protein (347aa)
putative phosphotransferase (EC:2.7.1.-); K07102 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
aminoglycoside phosphotransferase id=12555511 bin=CNBR_ACIDO species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aminoglycoside phosphotransferase
13_1_40cm_scaffold_720_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15037..15945)
DNA (909bp) protein (303aa)
nucleoside-diphosphate-sugar pyrophosphorylase (EC:2.7.7.13); K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria
nucleoside-diphosphate-sugar pyrophosphorylase (EC:2.7.7.13)
nucleotidyl transferase id=12555510 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_720_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15971..16309)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B6F036
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_720_16
unknown

Not on your lists

16700..16903
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_scaffold_720_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(16917..18338)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E4H9_GEOSM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_scaffold_720_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18412..19989)
DNA (1578bp) protein (526aa)
endopeptidase (EC:3.4.21.-)
putative Serine protease do-like precursor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative Serine protease do-like precursor id=12555508 bin=CNBR_ACIDO species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_720_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20054..21268)
DNA (1215bp) protein (405aa)
Xaa-Pro aminopeptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidase M24 id=12555507 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Xaa-Pro aminopeptidase
13_1_40cm_scaffold_720_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

21404..23509
DNA (2106bp) protein (702aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLA2_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_720_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23747..24076
DNA (330bp) protein (110aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=14627935 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_720_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24245..24781)
DNA (537bp) protein (179aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_720_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(24886..25344)
DNA (459bp) protein (153aa)
id=12555506 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=12555506 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_720_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

25364..25783
DNA (420bp) protein (140aa)
glyoxalase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B6235F
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_scaffold_720_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(25831..27987)
DNA (2157bp) protein (719aa)
glgP; glycogen phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
glgP; glycogen phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] id=14429978 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
glgP; glycogen phosphorylase (EC:2.4.1.1)
13_1_40cm_scaffold_720_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(27984..29012)
DNA (1029bp) protein (343aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025L3_SOLUE
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_scaffold_720_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(29092..29538)
DNA (447bp) protein (149aa)
nucleoside 2-deoxyribosyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Putative deoxyribonucleoside 5'-monophosphate N-glycosidase id=4010262 bin=PER_GWC2_41_7 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
nucleoside 2-deoxyribosyltransferase
13_1_40cm_scaffold_720_28
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(29549..30682)
DNA (1134bp) protein (378aa)
L-aminopeptidase/D-esterase n=2 Tax=Singulisphaera acidiphila RepID=L0DHN9_SINAD
L-aminopeptidase/D-esterase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
L-aminopeptidase/D-esterase
13_1_40cm_scaffold_720_29
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

30852..33341
DNA (2490bp) protein (830aa)
pgl_3; 6-phosphogluconolactonase (EC:3.1.1.31)
Hypothetical conserved protein n=1 Tax=uncultured planctomycete RepID=H5SJR3_9BACT
Phosphoesterase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_720_30
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33395..35896
DNA (2502bp) protein (834aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI00035D9B90
Phosphoglycerol transferase {ECO:0000313|EMBL:KIG13662.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
Displaying items 1-30 of 52 in total

View Taxonomy