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13_1_40cm_scaffold_775

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_775_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1..1236
DNA (1236bp) protein (412aa)
ABC-type multidrug transport system, ATPase and permease component n=2 Tax=Singulisphaera acidiphila RepID=L0DAT4_SINAD
multidrug ABC transporter ATPase/permease
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGA25938.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; S
13_1_40cm_scaffold_775_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1634..1867
DNA (234bp) protein (78aa)
prevent-host-death protein n=1 Tax=Salinispora pacifica RepID=UPI0003645ADB
antitoxin of toxin-antitoxin system, phd type Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
prevent-host-death family protein
13_1_40cm_scaffold_775_3
Synechococcus sp. RS9917, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1833..2246
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3ZAE0_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:EAQ68028.1}; TaxID=221360 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. RS9917.;"
PilT protein domain-containing protein
13_1_40cm_scaffold_775_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2636..3619
DNA (984bp) protein (328aa)
DNA primase small subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE84_ANADF
eukaryotic-type DNA primase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
DNA primase small subunit
13_1_40cm_scaffold_775_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3564..4691)
DNA (1128bp) protein (376aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ligC; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=14629243 bin=bin8_Chloro species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent DNA ligase
13_1_40cm_scaffold_775_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4691..5671)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003789A03
histone deacetylase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
histone deacetylase superfamily protein
13_1_40cm_scaffold_775_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6295..8034)
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00035DC4BE
Uncharacterized protein {ECO:0000313|EMBL:EYF06377.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
13_1_40cm_scaffold_775_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8128..8946)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZB19_TERRK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_775_9
unknown

Not on your lists

8984..9223
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_scaffold_775_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9171..9764)
DNA (594bp) protein (198aa)
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
4-diphosphocytidyl-2C-methyl-D-erythritolsynthas E id=2013955 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
metal-dependent phosphohydrolase HD sub domain-containing protein
13_1_40cm_scaffold_775_11
Plasmodium falciparum, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

10024..10200
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW40060.1}; TaxID=1036726 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).;" source=
13_1_40cm_scaffold_775_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10384..10590
DNA (207bp) protein (69aa)
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) id=12556558 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cold-shock DNA-binding protein family
13_1_40cm_scaffold_775_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10914..11534)
DNA (621bp) protein (207aa)
hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Putative uncharacterized protein id=2308611 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hydrolase
13_1_40cm_scaffold_775_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11614..11814)
DNA (201bp) protein (67aa)
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) id=12556558 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cold-shock DNA-binding protein family
13_1_40cm_scaffold_775_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12030..12485)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Pseudomonas fragi RepID=UPI0003715962
atpases of the aaa+ class Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
putative uncharacterized protein
13_1_40cm_scaffold_775_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12512..13228)
DNA (717bp) protein (239aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ABC transporter, ATP-binding protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q6C0_BREDI
proV; glycine betaine/proline porter
13_1_40cm_scaffold_775_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13225..13665)
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_775_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

13774..14205
DNA (432bp) protein (144aa)
Type 12 methyltransferase n=1 Tax=Desulfovibrio sp. X2 RepID=S7TL85_9DELT
tehB; SAM-dependent methyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
type 12 methyltransferase
13_1_40cm_scaffold_775_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14145..14996)
DNA (852bp) protein (284aa)
phP-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
phP-like protein id=12556561 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phP-like protein
13_1_40cm_scaffold_775_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14993..15949)
DNA (957bp) protein (319aa)
Fe2+/Zn2+ uptake regulation protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Ferric uptake regulator, Fur family id=12556562 bin=CNBR_ACIDO species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ferric uptake regulation protein
13_1_40cm_scaffold_775_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16025..16354)
DNA (330bp) protein (110aa)
iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein id=12556563 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
iron-sulfur cluster assembly accessory protein
13_1_40cm_scaffold_775_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16375..17316
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q0P4_DESAF
protein involved in formate dehydrogenase formation; K02380 FdhE protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
formate dehydrogenase accessory protein
13_1_40cm_scaffold_775_23
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17288..17632)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Geobacillus thermoglucosidans TNO-09.020 RepID=I0U7C3_GEOTM
Synaptonemal complex 1
Synaptonemal complex 1 {ECO:0000313|EMBL:ADP75186.1}; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain Y4.1MC1).;"
13_1_40cm_scaffold_775_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17763..19307)
DNA (1545bp) protein (515aa)
fumarase (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
fumarase (EC:4.2.1.2)
fumarate hydratase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035D1033
13_1_40cm_scaffold_775_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19350..20837
DNA (1488bp) protein (496aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Fumarate hydratase class II id=3653783 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
aspA; aspartate ammonia-lyase
13_1_40cm_scaffold_775_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20988..21491
DNA (504bp) protein (168aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
type 11 methyltransferase id=12556565 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
methyltransferase type 11
13_1_40cm_scaffold_775_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(21553..22137)
DNA (585bp) protein (195aa)
BioY protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFV2_9BACT
BioY protein; K03523 putative biotin biosynthesis protein BioY Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
BioY protein
13_1_40cm_scaffold_775_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

22180..22998
DNA (819bp) protein (273aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Phosphomethylpyrimidine kinase n=1 Tax=Geobacillus thermoglucosidans TNO-09.020 RepID=I0UA10_GEOTM
phosphomethylpyrimidine kinase
13_1_40cm_scaffold_775_29
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23210..23701
DNA (492bp) protein (164aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
molybdopterin converting factor-like protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=12556567 bin=CNBR_ACIDO species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
molybdenum cofactor biosynthesis protein D/E
13_1_40cm_scaffold_775_30
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

23698..23937
DNA (240bp) protein (80aa)
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=12556568 bin=CNBR_ACIDO species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
molybdopterin converting factor subunit 1
Displaying items 1-30 of 47 in total

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