ggKbase home page

13_1_40cm_scaffold_865

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_865_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(105..638)
DNA (534bp) protein (178aa)
protein tyrosine/serine phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
protein tyrosine/serine phosphatase
protein tyrosine/serine phosphatase id=17858 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
13_1_40cm_scaffold_865_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(788..1909)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAH9_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_865_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2328..2516
DNA (189bp) protein (63aa)
protein of unknown function DUF433 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Type III restriction-modification enzyme,R/helicase subunit id=4121891 bin=GWC2_Nitrospirae_57_13 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
protein of unknown function DUF433
13_1_40cm_scaffold_865_4
unknown

Not on your lists

comp(2521..2772)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_scaffold_865_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3105..3266
DNA (162bp) protein (54aa)
adenine specific DNA methylase Mod Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_865_6
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

3325..5178
DNA (1854bp) protein (618aa)
hypothetical protein id=24442036 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
penicillin-binding protein
13_1_40cm_scaffold_865_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(5216..6328)
DNA (1113bp) protein (371aa)
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; Flags: Precursor;; TaxID=234267 species="Bact
Homoserine O-acetyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XN4_SOLUE
13_1_40cm_scaffold_865_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6343..6804
DNA (462bp) protein (154aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN83_9BACT
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EEF58745.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivi
hypothetical protein
13_1_40cm_scaffold_865_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6827..7093
DNA (267bp) protein (89aa)
glycosyl hydrolase n=1 Tax=Spirosoma luteum RepID=UPI00036C1570
glycosyl hydrolase
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:ADB37619.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;"
13_1_40cm_scaffold_865_10
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

comp(7062..7388)
DNA (327bp) protein (109aa)
Putative uncharacterized protein id=4838558 bin=GWC2_Planctomycete_KSU_39_26 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
13_1_40cm_scaffold_865_11
unknown

Not on your lists

comp(7458..7973)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_scaffold_865_12
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

8271..8789
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEB2_THET1
colicin uptake protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
hypothetical protein
13_1_40cm_scaffold_865_13
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(8921..9316)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EAC
DoxX; K15977 putative oxidoreductase Tax=RBG_13_Acidobacteria_68_16_curated
DoxX family protein
13_1_40cm_scaffold_865_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(9313..9780)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TSZ6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH83547.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_scaffold_865_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9976..10173
DNA (198bp) protein (66aa)
TldD/PmbA family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A742_GEMAT
TldD/PmbA family protein
TldD/PmbA family protein {ECO:0000313|EMBL:BAH38052.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T
13_1_40cm_scaffold_865_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(10188..11081)
DNA (894bp) protein (298aa)
DNA adenine methylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
DNA adenine methylase id=12554959 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA adenine methylase
13_1_40cm_scaffold_865_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11251..11646
DNA (396bp) protein (132aa)
Cupin 2 barrel domain protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PC41_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_865_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11713..12732
DNA (1020bp) protein (340aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 18 items

View Taxonomy