ggKbase home page

13_1_40cm_scaffold_9252

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_9252_1

Not on your lists

comp(1..156)
DNA (156bp) protein (52aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-) id=12554717 bin=CNBR_ACIDO species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
3R-hydroxymyristoyl-[acyl carrier protein {ECO:0000313|EMBL:AHN97854.1}; TaxID=1447236 species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;"
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
13_1_40cm_scaffold_9252_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

350..2155
DNA (1806bp) protein (602aa)
serine phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
serine phosphatase id=12554716 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
serine phosphatase
13_1_40cm_scaffold_9252_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2301..2651)
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_9252_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(3076..4422)
DNA (1347bp) protein (449aa)
glnA; glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Glutamine synthetase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2W6_METPS
glnA-3; glutamine synthetase
13_1_40cm_scaffold_9252_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

4519..5592
DNA (1074bp) protein (358aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UK0_SOLUE
PDZ/DHR/GLGF Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PDZ/DHR/GLGF domain-containing protein
13_1_40cm_scaffold_9252_6

Not on your lists

comp(5510..6688)
DNA (1179bp) protein (393aa)
PAS/PAC and GAF sensor-containing diguanylate cyclase {ECO:0000313|EMBL:AHN97857.1}; TaxID=1447236 species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;"
id=12554715 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_9252_7
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7032..7289
DNA (258bp) protein (86aa)
Multidrug ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIF81777.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum
export ABC transporter permease
Uncharacterized protein id=3746793 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_9252_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

7640..9517
DNA (1878bp) protein (626aa)
pyruvate ferredoxin oxidoreductase, alpha chain (EC:1.2.7.1); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
pyruvate ferredoxin oxidoreductase, alpha chain (EC:1.2.7.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000378B61D
13_1_40cm_scaffold_9252_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

9542..10429
DNA (888bp) protein (296aa)
2-oxoacid:acceptor oxidoreductase subunit beta, pyruvate/2-ketoisovalerate family; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003653468
pyruvate-ferredoxin oxidoreductase and related 2-oxoacid-ferredoxin oxidoreductases subunit beta
13_1_40cm_scaffold_9252_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10439..10948
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B640_PELLD
YbaK/prolyl-tRNA synthetase associated domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_9252_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10936..11310
DNA (375bp) protein (125aa)
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
4Fe-4S ferredoxin id=12555456 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
4Fe-4S ferredoxin
Displaying 11 items

View Taxonomy