ggKbase home page

13_1_40cm_scaffold_981

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_981_1
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

2..634
DNA (633bp) protein (211aa)
Thiol oxidoreductase-like protein n=1 Tax=uncultured Acidobacteria bacterium RepID=F2YWV5_9BACT
Thiol oxidoreductase-like protein {ECO:0000313|EMBL:AEA09215.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
thiol oxidoreductase-like protein
13_1_40cm_scaffold_981_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(777..1814)
DNA (1038bp) protein (346aa)
malate/L-lactate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B47130
Malate/L-lactate dehydrogenase
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:AHG88250.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_981_3
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

1839..2438
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNU0_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75460.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-
13_1_40cm_scaffold_981_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2678..3403
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B69C2B
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
13_1_40cm_scaffold_981_5
R_OD1_Yanofskybacteria_50_12, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3540..4175
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2APS3_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_50_12_curated
hypothetical protein
13_1_40cm_scaffold_981_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4323..5561)
DNA (1239bp) protein (413aa)
Low-specificity D-threonine aldolase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VAX6_9BACT
alanine racemase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
alanine racemase
13_1_40cm_scaffold_981_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

5610..6860
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003680ABF
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:AIE85923.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas gins
13_1_40cm_scaffold_981_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6862..7368)
DNA (507bp) protein (169aa)
glcG; GlcG Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol id=4954842 bin=GWC2_Methylomirabilis_70_24 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glcG; GlcG
13_1_40cm_scaffold_981_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

7428..7727
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D37_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81029.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_scaffold_981_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7741..8787
DNA (1047bp) protein (349aa)
L-asparaginase n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5ECZ5_9BURK
ansZ; L-asparaginase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
L-asparaginase
13_1_40cm_scaffold_981_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8793..10151
DNA (1359bp) protein (453aa)
Glycosyl hydrolase, family 88 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029Z8_SOLUE
glycosyl hydrolase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glycosyl hydrolase family protein
13_1_40cm_scaffold_981_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10148..10924
DNA (777bp) protein (259aa)
3-ketoacyl-ACP reductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Short-chain dehydrogenase/reductase SDR id=4261360 bin=GWF2_Lentisphaerae_52_8 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
3-ketoacyl-ACP reductase
13_1_40cm_scaffold_981_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10957..11364
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000365C697
rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:AEA22814.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str
13_1_40cm_scaffold_981_14
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11378..11593
DNA (216bp) protein (72aa)
hydrolase CocE/NonD family protein; K06978 Tax=GWA2_Ignavibacteria_54_16_curated
13_1_40cm_scaffold_981_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11563..13854)
DNA (2292bp) protein (764aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031C90E0
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
periplasmic sensor hybrid histidine kinase
13_1_40cm_scaffold_981_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13851..14858)
DNA (1008bp) protein (336aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_981_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14855..15364)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZE34_TERRK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_981_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15593..16624
DNA (1032bp) protein (344aa)
YVTN beta-propeller repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD71_9BACT
YVTN beta-propeller repeat-containing protein {ECO:0000313|EMBL:EEF62017.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia s
hypothetical protein
13_1_40cm_scaffold_981_19
unknown

Not on your lists

16706..16975
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_scaffold_981_20
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(17166..17705)
DNA (540bp) protein (180aa)
hypothetical protein id=14630359 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
CHRD domain-containing protein
13_1_40cm_scaffold_981_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17721..20162)
DNA (2442bp) protein (814aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6E6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40021.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_scaffold_981_22
unknown

Not on your lists

comp(20632..20808)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_scaffold_981_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(20851..22140)
DNA (1290bp) protein (430aa)
Pyrrolo-quinoline quinone n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SNU7_PLAL2
pyrrolo-quinoline quinone Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
pyrrolo-quinoline quinone
13_1_40cm_scaffold_981_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(22845..23585)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=uncultured gamma proteobacterium HF4000_48E10 RepID=E7C8S4_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_981_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(24260..25417)
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WG0_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_981_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(25564..26298)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAH9_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_981_27
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(26582..27016)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAH9_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_981_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(26968..27591)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAH9_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_981_29
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(27653..28147)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAI0_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_981_30
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(28159..29109)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAH9_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy