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13_1_40cm_scaffold_1025

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1025_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..554)
DNA (552bp) protein (184aa)
groEL; chaperonin GroEL; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
groEL; chaperonin GroEL; K04077 chaperonin GroEL id=12554189 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
groEL; molecular chaperone GroEL
13_1_40cm_scaffold_1025_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(593..901)
DNA (309bp) protein (103aa)
chaperonin Cpn10; K04078 chaperonin GroES Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
chaperonin Cpn10; K04078 chaperonin GroES id=12554188 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Co-chaperonin GroES (HSP10)
13_1_40cm_scaffold_1025_3
unknown

Not on your lists

comp(1020..1739)
DNA (720bp) protein (240aa)

This feature has no annotations

13_1_40cm_scaffold_1025_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2017..2208)
DNA (192bp) protein (64aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_1025_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2165..4240)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPL9_CHIPD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_scaffold_1025_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(4310..5542)
DNA (1233bp) protein (411aa)
glycolate oxidase (EC:1.1.3.15); K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB6_SOLUE
FMN-dependent alpha-hydroxy acid dehydrogenase
13_1_40cm_scaffold_1025_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(5581..6909)
DNA (1329bp) protein (443aa)
glycolate oxidase (EC:1.1.3.15); K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB6_SOLUE
FMN-dependent alpha-hydroxy acid dehydrogenase
13_1_40cm_scaffold_1025_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6921..10463)
DNA (3543bp) protein (1181aa)
TonB-dependent receptor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y43_SOLUE
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
TonB-dependent receptor
13_1_40cm_scaffold_1025_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10540..12486)
DNA (1947bp) protein (649aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VJ1_SOLUE
thiol-disulfide isomerase or thioredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
thiol-disulfide isomerase
13_1_40cm_scaffold_1025_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12486..12911)
DNA (426bp) protein (142aa)
Cytochrome c, class I n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M9_SOLUE
class I cytochrome c Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
class I cytochrome c
13_1_40cm_scaffold_1025_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12920..13315)
DNA (396bp) protein (132aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_1025_12
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13312..13863)
DNA (552bp) protein (184aa)
flavin reductase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B691BE
Pseudomonas putida strain UASWS0946 Contig160, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52607.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomon
flavin oxidoreductase
13_1_40cm_scaffold_1025_13
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13865..15340)
DNA (1476bp) protein (492aa)
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Burkholderia sp. YI23 RepID=G8MFR9_9BURK
4-hydroxyphenylacetate 3-monooxygenase {ECO:0000313|EMBL:KHD21528.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
4-hydroxyphenylacetate 3-hydroxylase
13_1_40cm_scaffold_1025_14
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

15456..16772
DNA (1317bp) protein (439aa)
Helix-turn-helix domain protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TBY4_METSL
Transcriptional regulator, MerR family
Tax=BJP_IG2069_Methanobacteriales_33_27
13_1_40cm_scaffold_1025_15
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16769..17464
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000372E734
Uncharacterized protein {ECO:0000313|EMBL:KHQ95548.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein
13_1_40cm_scaffold_1025_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17608..17988
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X0K4_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
cupin
13_1_40cm_scaffold_1025_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(18206..20152)
DNA (1947bp) protein (649aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022Q6_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
Displaying 17 items

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