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13_1_40cm_scaffold_1043

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1043_1
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1100
DNA (1098bp) protein (366aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
13_1_40cm_scaffold_1043_2

Not on your lists

comp(1057..1845)
DNA (789bp) protein (263aa)
Formyl transferase-like protein
Formyl transferase-like protein {ECO:0000313|EMBL:AJF60160.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Formyl transferase-like id=5241169 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_scaffold_1043_3
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1842..2753)
DNA (912bp) protein (304aa)
Polysaccharide deacetylase domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CP29_MYXFH
Polysaccharide deacetylase {ECO:0000313|EMBL:AKF80404.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myx
polysaccharide deacetylase domain-containing protein
13_1_40cm_scaffold_1043_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2753..4108)
DNA (1356bp) protein (452aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6M5_9BACT
amine oxidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_scaffold_1043_5
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(4188..4838)
DNA (651bp) protein (217aa)
type 11 methyltransferase Tax=RBG_16_Planctomycetes_59_8_curated
Methyltransferase type 11 id=5800021 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
type 11 methyltransferase
13_1_40cm_scaffold_1043_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4816..5760)
DNA (945bp) protein (315aa)
nucleotide sugar epimerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_scaffold_1043_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(5757..6824)
DNA (1068bp) protein (356aa)
rffG1; dTDP-glucose 4,6-dehydratase 2 (EC:4.2.1.46) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIQ8_HALO1
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_1043_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6996..7637)
DNA (642bp) protein (214aa)
MarR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Putative transcriptional regulator, AsnC family id=2250628 bin=GWA2_Elusimicrobia_69_24 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
MarR family transcriptional regulator
13_1_40cm_scaffold_1043_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(7720..8430)
DNA (711bp) protein (237aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003628D67
13_1_40cm_scaffold_1043_10
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(8427..9467)
DNA (1041bp) protein (347aa)
N-acetylneuraminate synthase (EC:2.5.1.56); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=GWF2_WOR_2_43_52_curated
putative n-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase id=4686004 bin=GWC2_OP3_44_8 species=Methanococcus aeolicus genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
13_1_40cm_scaffold_1043_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9467..10651)
DNA (1185bp) protein (395aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EAT2_9FLAO
UDP-N-acetylglucosamine 2-epimerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
UDP-N-acetylglucosamine 2-epimerase
13_1_40cm_scaffold_1043_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(10826..12223)
DNA (1398bp) protein (466aa)
aldehyde dehydrogenase (EC:1.2.1.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
aldehyde dehydrogenase (EC:1.2.1.3)
NAD-dependent aldehyde dehydrogenase id=2619814 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
13_1_40cm_scaffold_1043_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12394..14340)
DNA (1947bp) protein (649aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Transketolase id=2619808 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
transketolase
13_1_40cm_scaffold_1043_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(14435..15256)
DNA (822bp) protein (274aa)
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Oxidoreductase, short chain dehydrogenase/reductase family protein id=2619819 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
oxidoreductase, short chain dehydrogenase
13_1_40cm_scaffold_1043_15
unknown

Not on your lists

comp(15524..15646)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 15 items

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