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13_1_40cm_scaffold_1058

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1058_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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3..899
DNA (897bp) protein (299aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555419 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1058_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(908..1696)
DNA (789bp) protein (263aa)
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] id=12555820 bin=CNBR_ACIDO species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA pseudouridine synthase A
13_1_40cm_scaffold_1058_3
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1678..2226)
DNA (549bp) protein (183aa)
Transcriptional regulator, PadR-family n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZJ39_TERRK
transcriptional regulator, PadR-family
Transcriptional regulator, PadR-family {ECO:0000313|EMBL:AFL89257.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (str
13_1_40cm_scaffold_1058_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2268..3884
DNA (1617bp) protein (539aa)
Serine phosphatase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027G7_SOLUE
serine phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
serine phosphatase
13_1_40cm_scaffold_1058_5
unknown

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3912..4385
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_scaffold_1058_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4460..4807
DNA (348bp) protein (116aa)
Anti-sigma factor antagonist n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2W5_9BACT
anti-anti-sigma factor; K04749 anti-sigma B factor antagonist Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
anti-anti-sigma factor
13_1_40cm_scaffold_1058_7
unknown

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comp(4804..5244)
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_scaffold_1058_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(6286..7299)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EB3E06
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_1058_9
Fukomys damarensis, Fukomys, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

7397..8443
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B77CBC
MAP7 domain-containing protein 1 {ECO:0000313|EMBL:KFO24336.1}; TaxID=885580 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Ro
TonB family protein
13_1_40cm_scaffold_1058_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9365..10243
DNA (879bp) protein (293aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QFZ1_SPILD
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB41454.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
13_1_40cm_scaffold_1058_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10264..11619
DNA (1356bp) protein (452aa)
oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C403A
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGA31036.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acid
13_1_40cm_scaffold_1058_12
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12049..15252
DNA (3204bp) protein (1068aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4910F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL90509.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus
13_1_40cm_scaffold_1058_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15291..17813
DNA (2523bp) protein (841aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NB1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84715.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_scaffold_1058_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17949..19418
DNA (1470bp) protein (490aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020E9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84716.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_scaffold_1058_15
uncultured Poribacteria bacterium 64K2, Poribacteria, Bacteria

Not on your lists

19422..20309
DNA (888bp) protein (296aa)
polysaccharide deacetylase n=1 Tax=Schlesneria paludicola RepID=UPI00029A49BB
Hypothetical deacetylase {ECO:0000313|EMBL:AAW84310.1}; TaxID=309182 species="Bacteria; Poribacteria; environmental samples.;" source="uncultured Poribacteria bacterium 64K2.;"
xylanase/chitin deacetylase
Displaying 15 items

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