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13_1_40cm_scaffold_1219

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1219_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1..309
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037B4A2F
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
4Fe-4S ferredoxin
13_1_40cm_scaffold_1219_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

404..1918
DNA (1515bp) protein (505aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TPR repeat-containing protein id=4192675 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyltransferase 9 family protein
13_1_40cm_scaffold_1219_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2094..2570)
DNA (477bp) protein (159aa)
acyl-CoA hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thioesterase id=12555454 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
yciA; thioesterase superfamily protein YciA
13_1_40cm_scaffold_1219_4
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

2687..4207
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371977B
Mo-co oxidoreductase dimerization domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
13_1_40cm_scaffold_1219_5
unknown

Not on your lists

comp(4210..4722)
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_40cm_scaffold_1219_6
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4778..5251)
DNA (474bp) protein (158aa)
MarR family protein n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6I8W2_9LEPT
MarR family protein {ECO:0000313|EMBL:EQA54652.1}; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysia str. Bejo-Iso9
regulatory protein MarR
13_1_40cm_scaffold_1219_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5379..8579)
DNA (3201bp) protein (1067aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
peptidase S9B dipeptidylpeptidase IV domain-containing protein id=12555453 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
surface antigen (D15)
13_1_40cm_scaffold_1219_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

8851..9423
DNA (573bp) protein (191aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14626591 bin=bin7_NC10_sister species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_scaffold_1219_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

9416..10243
DNA (828bp) protein (276aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_scaffold_1219_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

10409..10966
DNA (558bp) protein (186aa)
Thioredoxin-like protein n=1 Tax=uncultured bacterium 70 RepID=E3T6K0_9BACT
alkyl hydroperoxide reductase; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
redoxin domain-containing protein
13_1_40cm_scaffold_1219_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

11029..11253
DNA (225bp) protein (75aa)
id=12555451 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
id=12555451 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_1219_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

11350..12654
DNA (1305bp) protein (435aa)
Secretion protein HlyD n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLM2_9BACT
RND family efflux pump membrane fusion protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Secretion protein HlyD
13_1_40cm_scaffold_1219_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

12656..13351
DNA (696bp) protein (232aa)
antimicrobial peptide ABC transporter ATPase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ABC transporter related, ATP binding protein id=4913300 bin=GWA2_Ignavibacteria_55_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
antimicrobial peptide ABC transporter ATPase
13_1_40cm_scaffold_1219_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

13457..14608
DNA (1152bp) protein (384aa)
ABC transporter, membrane protein n=2 Tax=Geobacter metallireducens RepID=Q39SZ3_GEOMG
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
MacB-like periplasmic core domain protein
13_1_40cm_scaffold_1219_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

14608..15774
DNA (1167bp) protein (389aa)
Macrolide ABC transport system permease protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PDQ3_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_40cm_scaffold_1219_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

15781..16680
DNA (900bp) protein (300aa)
fatty-acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
acyl-CoA desaturase (EC:1.14.19.1)
Stearoyl-CoA 9-desaturase n=1 Tax=Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 RepID=N1VS86_9LEPT
13_1_40cm_scaffold_1219_17
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16631..17401)
DNA (771bp) protein (257aa)
Short-chain dehydrogenase/reductase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EQ99_MODMB
Short-chain dehydrogenase {ECO:0000313|EMBL:KGH45775.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;
short-chain dehydrogenase
13_1_40cm_scaffold_1219_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17385..18116)
DNA (732bp) protein (244aa)
hypothetical protein; K06896 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein; K06896 id=12555449 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1219_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

18145..18519
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_scaffold_1219_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

18662..18964
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555448 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1219_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(19267..19929)
DNA (663bp) protein (221aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=12555447 bin=CNBR_ACIDO species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1219_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19913..20782)
DNA (870bp) protein (290aa)
electron transport protein SCO1/SenC; K07152 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
electron transport protein SCO1/SenC; K07152 id=12555446 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
electron transport protein SCO1/SenC
13_1_40cm_scaffold_1219_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20799..21518
DNA (720bp) protein (240aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=12555433 bin=CNBR_ACIDO species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1219_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21748..22773)
DNA (1026bp) protein (342aa)
putative alpha/beta-hydrolase fold family hydrolase; K07019 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Alpha/beta hydrolase; K07019 id=12555432 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative alpha/beta-hydrolase fold family hydrolase
13_1_40cm_scaffold_1219_25
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(22808..24055)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003643C6D
ASPIC/UnbV domain-containing protein Tax=RBG_13_Caldithrix_44_9_curated
ASPIC/UnbV domain-containing protein
Displaying 25 items

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