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13_1_40cm_scaffold_12343

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12343_1
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3..950)
DNA (948bp) protein (316aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZY6_TERSS
40-residue YVTN family beta-propeller repeat-containing protein
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:ADV81063.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;
13_1_40cm_scaffold_12343_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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1291..1593
DNA (303bp) protein (101aa)
ureA; urease subunit gamma; K01430 urease subunit gamma [EC:3.5.1.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
urease subunit gamma n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026272C5
ureA; urease subunit gamma
13_1_40cm_scaffold_12343_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1781..2143
DNA (363bp) protein (121aa)
bifunctional urease subunit gamma/beta (EC:3.5.1.5); K14048 urease subunit gamma/beta [EC:3.5.1.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ureB; urease beta subunit (EC:3.5.1.5)
urease subunit beta n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026272C4
13_1_40cm_scaffold_12343_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2323..4029
DNA (1707bp) protein (569aa)
ureC; urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
urease subunit alpha n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026272C3
ureC; urease subunit alpha
13_1_40cm_scaffold_12343_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4216..4668
DNA (453bp) protein (151aa)
urease accessory protein UreE n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026272C2
urease accessory protein UreE Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UreE urease accessory domain-containing protein
13_1_40cm_scaffold_12343_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4964..5626
DNA (663bp) protein (221aa)
urease accessory protein UreF n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026272C1
ureF; urease accessory protein UreF; K03188 urease accessory protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
urease accessory protein UreF
13_1_40cm_scaffold_12343_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5887..6411
DNA (525bp) protein (175aa)
urease accessory protein UreG n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026272C0
ureG; urease accessory protein UreG; K03189 urease accessory protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
urease accessory protein ureG
13_1_40cm_scaffold_12343_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6486..7433
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036F15A5
urease accessory protein UreD; K03190 urease accessory protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
urease accessory protein ureD
13_1_40cm_scaffold_12343_9
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

7648..8001
DNA (354bp) protein (118aa)
selenocysteine synthase-like protein Tax=RBG_13_Aminicenantes_62_12_curated
selenocysteine synthase-like protein id=24491070 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_scaffold_12343_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8053..8802
DNA (750bp) protein (250aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
selenocysteine synthase-like protein id=24491070 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
selenocysteine synthase-like protein
13_1_40cm_scaffold_12343_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8775..9785
DNA (1011bp) protein (337aa)
TRAP dicarboxylate transporter subunit DctP Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TRAP dicarboxylate transporter subunit DctP id=24555869 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
TRAP dicarboxylate transporter subunit DctP
13_1_40cm_scaffold_12343_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9782..11650
DNA (1869bp) protein (623aa)
TRAP dicarboxylate transporter subunit DctM Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TRAP dicarboxylate transporter subunit DctM id=24555870 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_40cm_scaffold_12343_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11960..12589)
DNA (630bp) protein (210aa)
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
two component LuxR family transcriptional regulator Tax=CSP1_5_NC10
LuxR family response regulator
13_1_40cm_scaffold_12343_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12600..13007)
DNA (408bp) protein (136aa)
putative PAS/PAC sensor histidine kinase id=14430686 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
putative PAS/PAC sensor histidine kinase Tax=CSP1_5_NC10
integral membrane sensor signal transduction histidine kinase
Displaying 14 items

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