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13_1_40cm_scaffold_130

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_130_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..372)
DNA (372bp) protein (124aa)
apaG; ApaG protein; K06195 ApaG protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ApaG domain-containing protein; K06195 ApaG protein id=12557807 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
apaG; ApaG protein
13_1_40cm_scaffold_130_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(385..1452)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000375A0B4
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89177.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_130_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1630..3669
DNA (2040bp) protein (680aa)
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_2
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Aquifex aeolicus (strain VF5) RepID=LEUC_AQUAE id=5224304 bin=16ft_combo_ws3_JS1 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_scaffold_130_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

3822..4220
DNA (399bp) protein (133aa)
ferredoxin n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B42830
(2Fe-2S) ferredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
(2Fe-2S) ferredoxin
13_1_40cm_scaffold_130_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4415..6847
DNA (2433bp) protein (811aa)
Macrolide transporter ATP-binding /permease protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QSA7_9CYAN
permease
Permease {ECO:0000313|EMBL:AHG89021.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_130_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7052..7372
DNA (321bp) protein (107aa)
id=12554310 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_130_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7524..7772
DNA (249bp) protein (83aa)
id=12554309 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
id=12554309 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_130_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7858..8433
DNA (576bp) protein (192aa)
Phospholipase/Carboxylesterase n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QLB3_CHLP8
phospholipase/carboxylesterase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
esterase/lipase
13_1_40cm_scaffold_130_9
Streptomyces cattleya, Streptomyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

8430..8885
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JJF3_STREN
hypothetical protein
Uncharacterized protein; TaxID=1003195 species="Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Streptomycineae; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
13_1_40cm_scaffold_130_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8840..9556)
DNA (717bp) protein (239aa)
dienelactone hydrolase; K07020 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
dienelactone hydrolase; K07020 id=14632694 bin=bin9_gal15 species=Arthrobacter sp. genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_scaffold_130_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9537..10097)
DNA (561bp) protein (187aa)
Putative phospholipid-binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC81_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_130_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10220..11359)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDU9_9CHLR
Ferritin-like domain fused to DUF125 family domain Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Ferritin-like domain fused to DUF125 family domain
13_1_40cm_scaffold_130_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11360..12106)
DNA (747bp) protein (249aa)
zinc/iron permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
zinc/iron permease id=12554463 bin=CNBR_ACIDO species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
zinc/iron permease
13_1_40cm_scaffold_130_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12296..13495)
DNA (1200bp) protein (400aa)
Putative von Willebrand factor type A domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC79_9ZZZZ
Mg-chelatase subunit ChlD; K07114 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Mg-chelatase subunit ChlD
13_1_40cm_scaffold_130_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13495..14262)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC78_9ZZZZ
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_130_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14426..15502)
DNA (1077bp) protein (359aa)
TonB family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TonB-like protein id=12554190 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB family protein
13_1_40cm_scaffold_130_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15735..16502
DNA (768bp) protein (256aa)
alcohol dehydrogenase, putative (EC:1.1.1.100) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WBF1_TRICA
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_130_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16578..17138)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC76_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_130_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17273..18586
DNA (1314bp) protein (438aa)
Myo-inositol-1-phosphate synthase (EC:5.5.1.4); K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Putative Myo-inositol-1-phosphate synthase n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC75_9ZZZZ
13_1_40cm_scaffold_130_20

Not on your lists

18624..19091
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC74_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ10183.1}; TaxID=455560 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10H12.;"
13_1_40cm_scaffold_130_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19284..20393
DNA (1110bp) protein (370aa)
MSHA biogenesis protein MshL; K12282 MSHA biogenesis protein MshL Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
mshL; MSHA biogenesis protein MshL; K12282 MSHA biogenesis protein MshL id=14429277 bin=bin3_NC10 species=Enterovibrio calviensis genus=Enterovibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
type II and III secretion system protein
13_1_40cm_scaffold_130_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20562..21515
DNA (954bp) protein (318aa)
gspA; general secretion pathway protein A; K02450 general secretion pathway protein A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Peptidoglycan-binding domain 1 protein id=1993777 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidoglycan-binding domain 1 protein
13_1_40cm_scaffold_130_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

22405..22860
DNA (456bp) protein (152aa)
protein kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K12600 superkiller protein 3 id=14429279 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
type 11 methyltransferase
13_1_40cm_scaffold_130_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

23519..23620
DNA (102bp) protein (34aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Acetyl-coenzyme A synthetase n=2 Tax=uncultured candidate division OP1 bacterium RepID=H5SS75_9BACT
Acetyl-coenzyme A synthetase
Displaying 24 items

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