ggKbase home page

13_1_40cm_scaffold_1485_2

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: 2982..3704

Top 3 Functional Annotations

Value Algorithm Source
TonB-like protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 249.0
  • Bit_score: 158
  • Evalue 1.20e-35
TonB-like protein; K03832 periplasmic protein TonB id=12556587 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 250.0
  • Bit_score: 141
  • Evalue 1.40e-30
TonB family protein similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 213.0
  • Bit_score: 92
  • Evalue 2.20e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGCCACACGAAATGTTCGGCGACGTCGCCGCTCGCCGTCCGTCGCGCACTCGGCTTCGTCGCGTCCTCACCATCTCTTCGATCGCGCTTCACGCGATCGTCATCTCCGCCGTTGTCGTCGTGCAGTTGTTCGCCGTCGGTCCACTGCCCGTTCCGCATCGTCCGCTGATCTTCGAAGAGCTTCGGCTCGTTCGTCTCGTCGACATTCCGCTGCCGCCACAGCCCCGTCGCGCGTCGGACGATCCGTCACCGTCGGTGTCGCCGAACGCCGCGCCGACCGTTGAGCCGAGCGGCATCACCGCTGAGACAGGTCTCGAGGGAACGCGAGCCAGCGCGGCGACGCCGGGCGTCGTCGGCGTGGAGCGCGGCAGCGGATTGGAATCAATCGGCGTCGTTCAAGGTGTCACCGCGCCTCCGCCACCGGCGCCGGCGCCGCCGGTTCGGCTGCACTCCGGCATGCAGGCGCCGGTCAAAACCGTTCACGTCGATCCGATCTATCCGGCCATCGCGCAAACAGCGCGCGTGCAGGGCGTCGTGATTCTCGAGGCGATCATCGACGAGCGCGGACTGGTGAAGTCGGTCAGCGTGCTTCGTTCGATCCCGCTGCTCGATCGCGCCGCGGAGGATGCGGTCCGGCAGTGGCGATTTACGCCAGCGCGGCTGAACAGTGAAGCGGTGCCGGTCGTGATGACCGTGACGGTGCGTTTCACGCTCGACCGATGA
PROTEIN sequence
Length: 241
MPHEMFGDVAARRPSRTRLRRVLTISSIALHAIVISAVVVVQLFAVGPLPVPHRPLIFEELRLVRLVDIPLPPQPRRASDDPSPSVSPNAAPTVEPSGITAETGLEGTRASAATPGVVGVERGSGLESIGVVQGVTAPPPPAPAPPVRLHSGMQAPVKTVHVDPIYPAIAQTARVQGVVILEAIIDERGLVKSVSVLRSIPLLDRAAEDAVRQWRFTPARLNSEAVPVVMTVTVRFTLDR*