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13_1_40cm_scaffold_1485

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1485_1
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..2893
DNA (2892bp) protein (964aa)
Putative cell surface protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZXQ9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EYR65054.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
putative cell surface protein
13_1_40cm_scaffold_1485_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2982..3704
DNA (723bp) protein (241aa)
TonB-like protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TonB-like protein; K03832 periplasmic protein TonB id=12556587 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB family protein
13_1_40cm_scaffold_1485_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4123..5649
DNA (1527bp) protein (509aa)
threonine dehydratase, biosynthetic; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
threonine dehydratase, biosynthetic; K01754 threonine dehydratase [EC:4.3.1.19] id=12557655 bin=CNBR_ACIDO species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
threonine dehydratase, biosynthetic
13_1_40cm_scaffold_1485_4
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

5950..6885
DNA (936bp) protein (312aa)
integral membrane sensor signal transduction histidine kinase id=12556075 bin=CNBR_ACIDO species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
integral membrane sensor signal transduction histidine kinase
Tax=BJP_IG2158_Anaerolineales_38_74
13_1_40cm_scaffold_1485_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6689..7660)
DNA (972bp) protein (324aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000363B5DC
pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_scaffold_1485_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7757..8521)
DNA (765bp) protein (255aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037B456C
putative glycerophosphoryl diester phosphodiesterase
13_1_40cm_scaffold_1485_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8567..10060
DNA (1494bp) protein (498aa)
magnesium protoporphyrin chelatase; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
magnesium protoporphyrin chelatase; K03405 magnesium chelatase subunit I [EC:6.6.1.1] id=12555463 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
magnesium protoporphyrin chelatase
13_1_40cm_scaffold_1485_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10060..11331
DNA (1272bp) protein (424aa)
von Willebrand factor, type A; K07114 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
von Willebrand factor, type A; K07114 uncharacterized protein id=12555464 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
von Willebrand factor A
13_1_40cm_scaffold_1485_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11426..12058
DNA (633bp) protein (211aa)
Putative Peptidase S16, lon-like n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAN4_9BACT
putative peptidase; K07157 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative peptidase
13_1_40cm_scaffold_1485_10
unknown

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comp(12080..12241)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_scaffold_1485_11
unknown

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comp(12252..12461)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_scaffold_1485_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12508..12714)
DNA (207bp) protein (69aa)
cold-shock protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB50
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cold-shock DNA-binding protein family
13_1_40cm_scaffold_1485_13
unknown

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comp(12939..13106)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_1485_14
unknown

Not on your lists

comp(13099..13365)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_scaffold_1485_15
unknown

Not on your lists

comp(13382..13615)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_scaffold_1485_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14062..14385
DNA (324bp) protein (108aa)
similar to cp31AHv protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
rnp-1 like RNA-binding protein id=12554817 bin=CNBR_ACIDO species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA-binding protein
13_1_40cm_scaffold_1485_17
unknown

Not on your lists

comp(14386..14559)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 17 items

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