ggKbase home page

13_1_40cm_scaffold_1645_10

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: comp(9352..10605)

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA (uracil-5-)-methyltransferase (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 425.0
  • Bit_score: 474
  • Evalue 1.80e-130
deoxyribonuclease; K00599 [EC:2.1.1.-] id=12555978 bin=CNBR_ACIDO species=Frankia sp. BMG5.12 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 438.0
  • Bit_score: 321
  • Evalue 1.80e-84
deoxyribonuclease/rho motif-related TRAM similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 445.0
  • Bit_score: 176
  • Evalue 1.50e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGCTCACGCCAGGCCAAACCCTTTCGCTCACGATCGACAAGCCCGCGGCCGGCGGCCGGATGATTGCGCGCGTGGACGGCCAGGTGGTCCTCGTGTCCGGCGCGATTCCGGGCGAGCGCGTGCGCGCGCGTATCGAGCGCGTCGGGAAGGGCGTCGCCTTTGCCGAGACGCTCGCGGTCGAGGAGGCGTCGCCCGATCGTCGCGAGCCGTTTGCCGATCCATTCTGTGGCGGCAATCTGTTCGGTCACATCGCGTACCGGCGTCAGCTCGAGATCAAGAGCCAGGTGATTGCGGATGCCTTCGCGCGCATCGGTCACGTGACGCTGCCGTCCGCGGTCGCCGTCGCCGCGTCGCCGGAGGACGGCTATCGCATGCGCGCGCGACTGCACCTTCGCGGTCATCGCGTCGGATTCTTCCGCGAAGCGACGCATGAGGTGTGCGAGGTGCGGCCGACGCGTCAGCTGCTGCCGGCGACGTGCGACACGCTCGACCGCCTGAGCGCCGCCATCAACTCGCTCGGCCTCCAGGACGTTCGCGAGATCGAGCTGTCCGAGAACGTCGACGCCACCGAGCGCGTGGTCCATCTCGACACGACACAGCCGCTCGACCCGCGCGTGCTCGAGAAGGTGCTGTCGGTCGACGGGCTGACGCCAGGCCCGTACGTCAACGATGTGCTGGCGATCGGCGACGCGACGATCAAGCTTCGCCGGCACGTCCTTGCGTTCTTTCAGGGGAATCGGTATCTGCTGAGAGATCTCGTCGCGCACGTGACGGAGCGCATCCCGATCGGGACGTCACTGCTCGATTTGTATGCCGGCGCGGGTCTGTTCTCGGTTGCCGCCGCGGTCCTGCGCGGCGCGTGGGTCGTCGCCGTCGAAGGGGACACGTTGGCCGCCGACGATCTCCACGCGAACGGCGTGGCCTCGGGCGCTCAAATCACGATGGTCAAAGGCGCGGTCGAAGGCGTGGCGACCGGCTACGCGCGCGCGATACAGCGTCACTACGGACAGCGTCTCGTCGAAACCGTCATCGTGGATCCGCCGCGTACCGGGATGACGCGAGCGGCGCTCGACGGGCTGCTGGGGATGAAGTCCGCGCGGCTGATTTACGTGTCGTGCGACGTCGCGACGCTCGCGCGCGACTCGCGCCGTCTCATCGACGCCGGCTACGCGATCGCTCGCGCCGACGCGTTCGATCTGTTTCCAAACACGCCGCACGTCGAAACCGTGGTCGTGTTCGACAGGCAGCCCTAA
PROTEIN sequence
Length: 418
MLTPGQTLSLTIDKPAAGGRMIARVDGQVVLVSGAIPGERVRARIERVGKGVAFAETLAVEEASPDRREPFADPFCGGNLFGHIAYRRQLEIKSQVIADAFARIGHVTLPSAVAVAASPEDGYRMRARLHLRGHRVGFFREATHEVCEVRPTRQLLPATCDTLDRLSAAINSLGLQDVREIELSENVDATERVVHLDTTQPLDPRVLEKVLSVDGLTPGPYVNDVLAIGDATIKLRRHVLAFFQGNRYLLRDLVAHVTERIPIGTSLLDLYAGAGLFSVAAAVLRGAWVVAVEGDTLAADDLHANGVASGAQITMVKGAVEGVATGYARAIQRHYGQRLVETVIVDPPRTGMTRAALDGLLGMKSARLIYVSCDVATLARDSRRLIDAGYAIARADAFDLFPNTPHVETVVVFDRQP*