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13_1_40cm_scaffold_3622_3

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: 1469..2578

Top 3 Functional Annotations

Value Algorithm Source
ntrX; two component signal transduction response regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 370.0
  • Bit_score: 465
  • Evalue 5.50e-128
sigma-54 dependent transcriptional regulator id=12557439 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 347.0
  • Bit_score: 415
  • Evalue 6.10e-113
crdA; sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 267.0
  • Bit_score: 264
  • Evalue 6.40e-68

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
GTGAAGGACACTAGCGAGTCTCTCGTCGGGATTGGGACCGCCATTCGCGCGATCGAAGCCGAGATCGAGTACGCCGCGCGCTCGGATGCGAAGGTCCTCATCACCGGCGAAAGCGGCGTGGGCAAGGAAGTCATCGCCCGCCTCGTCCATCAGCGCAGCCGTCGCGCGCACACGCCGCTCGTCACCATCAATTGCGCCGGCATCCCCGACTCGCTCCTCGAGTCGGCGCTCTTCGGTCACGTCAAAGGCAGCTTCACAGGAGCGTATCGCGATCGGCTCGGCCTCCTCGAGATGGCGCACCAGGGCACGATCTTCCTCGACGAGATCGGCGAGATGAGTCTGCGCATGCAGGCGCTCCTTCTGCGCTTCCTCGAGAACGGGGAAATCCAGCGCGTGGGCGCCGACCGCGTGCAGTCGCGCGTCGACGTGCGCGTCATCGCCGCGACCAATCGCAACCTGCTCGAACGGATCGCGTCGAAGGATTTTCGCGAGGACCTGTACTACCGGCTCAACGTCATCCACATCACGATCCCTGCCCTGCGGGCGCGACGTGAAGACATTCCGGTGTTCCTCGATTACTTCCTGCGTTCGTATGCGGAACGGCACGGGGTCAGGCCGCCCGAGCTCGCGCCCGATGCGCTCGCGCACCTGGTGGCCTACGACTGGCCGGGCAACGTCCGCGAACTGAAGAACGCCGCCGAGCGGCTGATCGTCCGCAGCCGAACCGGGTTGATCACGCTCACCGATCTGCCGGCTGAAATTCAACAGTGGGGACGGCCGGTAGTTGCGCAGCCGGCACCGGTCGGCGCGTCCGTGGCCGACGAATTGTACGAACGACTGGTCACACACCGCGAATCGTTCTGGTCGGTGATCTACCCGGCCTTCATGGCGCGCGATCTCACACGCGCCGACTTGCGCGCGGTGCTCCGCCGTGGACTGCAGCAAACCGGCGGGAACTACAAAGTGCTGGTCCAGCTGTTCAACATGCCGCCGACCGACTACAAACGCTTCCTGAACTTCTTGCGCAAGCACGAGTGCCACGTGCCGTTCCAGCGATTCAGGACGGCGCGTCCCTACGCGAGCGCCCGCGAGGTCACAGAAGACGTGTAA
PROTEIN sequence
Length: 370
VKDTSESLVGIGTAIRAIEAEIEYAARSDAKVLITGESGVGKEVIARLVHQRSRRAHTPLVTINCAGIPDSLLESALFGHVKGSFTGAYRDRLGLLEMAHQGTIFLDEIGEMSLRMQALLLRFLENGEIQRVGADRVQSRVDVRVIAATNRNLLERIASKDFREDLYYRLNVIHITIPALRARREDIPVFLDYFLRSYAERHGVRPPELAPDALAHLVAYDWPGNVRELKNAAERLIVRSRTGLITLTDLPAEIQQWGRPVVAQPAPVGASVADELYERLVTHRESFWSVIYPAFMARDLTRADLRAVLRRGLQQTGGNYKVLVQLFNMPPTDYKRFLNFLRKHECHVPFQRFRTARPYASAREVTEDV*