ggKbase home page

13_1_40cm_scaffold_544_2

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: 571..1386

Top 3 Functional Annotations

Value Algorithm Source
Cbr-col-72; C. briggsae CBR-COL-72 protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 270.0
  • Bit_score: 252
  • Evalue 7.10e-64
hypothetical protein id=24408280 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 195.0
  • Bit_score: 113
  • Evalue 3.70e-22
Collagen alpha-2(I) chain similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 190.0
  • Bit_score: 78
  • Evalue 2.80e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGAAGTTAGCGGGTCAAGCGCGGCACAATCAGCACGGCTATGCGATGGCCGCCCTCCTGGTCGCCATGGCAATCATGGCGATCATGATGACAGTCGCCATGCCCGTCTGGAAGCAGGCGGCCCAGCGCGAGAAGGAAGAGGAACTGATCTTTCGCGGCCTGCAGTACACCCACGCGATTGGTTTGTTCCAGCGCAAATACGCGAACGCGTACCCGCCCAACTTCGACGCGCTCGTCGAGCAGCGGTTCCTACGCAAAAAATTCAAGGACCCAATCACCAAAGACGATTTCCAGCCGTTGCTCGCCGGCCAGGGCACACCTGGCAGCGCCACGCCGGGAGGCCAGCCGCAATCACCGGGTGTCGGCGGTGCGGGTCGAGGAGCGATCGGCGCGCCCGGCGCCGGAATGGCCGGTACCGCTGGACGGGGAACGTCGCCGATAGGTGGAACGTCGCCGATAGGTACGCCAGGTGCGGGTCCTGTGGGCGGCGTCATCGGCGTCACGAGCAAGAGCAAAGAAAAGTCCCTTCGTCTGTACAACGGCCGCAATCATTACAACGAGTGGGCGTTCGTGTTCACGCCTCAGCTGCAAACACCGGGCGGCGGCGCGCCTGGTAGCGCTGTGCCGGGTCCGCCCGGGCAGCGTGGCCAGCCTGGACAACGCGGCCAGCCGGGTCAACGCGGCCCGGACGCCTCACCGTTCTCGCCAGTTCCTGGCCGCGGTGGACCTGGTGGCGGCCGAACCGGACCAGGCGGCCAGAATCCATTCCAGCCACAGCCGATCTTTCCGCCGCAACGCGGACGCTCTGGAGGTTAG
PROTEIN sequence
Length: 272
MKLAGQARHNQHGYAMAALLVAMAIMAIMMTVAMPVWKQAAQREKEEELIFRGLQYTHAIGLFQRKYANAYPPNFDALVEQRFLRKKFKDPITKDDFQPLLAGQGTPGSATPGGQPQSPGVGGAGRGAIGAPGAGMAGTAGRGTSPIGGTSPIGTPGAGPVGGVIGVTSKSKEKSLRLYNGRNHYNEWAFVFTPQLQTPGGGAPGSAVPGPPGQRGQPGQRGQPGQRGPDASPFSPVPGRGGPGGGRTGPGGQNPFQPQPIFPPQRGRSGG*