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13_1_40cm_scaffold_544_34

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: comp(34542..35969)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 476.0
  • Bit_score: 881
  • Evalue 4.20e-253
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 479.0
  • Bit_score: 744
  • Evalue 5.70e-212
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 481.0
  • Bit_score: 452
  • Evalue 1.60e-124

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGGGCATCCAGCAAAAACTCCACACCAAACTCGTTCAGAAACTGATCCTCACGCCCTCGCTGCAGCAGGCGATCAAGCTGTTGCCGATGTCGACGCTCGAGCTCTCGGACCTCCTGAACCAGGAGATGGTCGAGAACCCGATGCTCGAAGAGGTGCCGACCGAGGAACTGCAGCCCGCCGAGGCCGCAGCCGCGCCCGAAAAGGCCGAACCGGAACAGCAAAGCAACAAAACGGATACGTGGGACGATCAGGATTACGAGTATTTCTTCGGCGACTACCTCGACGACGGCTACCGGCCGCGCGCGCCGCAGGAAGTCAAAGAGCTCCCGCCGATCGAAAACACGCTGTCCACCGCCAGCTCGCTGTCCGATCACCTGATGTGGCAGCTTTCAATGCAGACCGACGACTCGTTGATACGCGAGATCGGGTCGGCCATCATCGGCAACCTCGACGACGACGGCTATCTGGTCGCGTCCTTCGACGAGCTGGCCGGGATGGGACCGTGGCCGGTCGCCGAGGTCGAGCGCGCGCTCAAGCTCGTTCAAGCGTTCGATCCGACCGGCGTCGCCGCGCGCGATCTCCAAGAGTGCCTGCTGCTGCAGCTCCGTCACCTCGGGCTCGAAGGCACGCCGACCGAGAAAGTCGTGACCGATCATCTGCGCCTCCTTCAGAACCATCAGGTGCCGGAAATCGCGCGCAAGCTCGGGATGACGATCGACGATCTCAAGGAGCACATCGAGATCATCCGGCATCTCGATCCGAAGCCGGGCAGCCGCTACAACCCGACGCAGTCCCAATACGTCATCCCCGACGTGTACGTCATGAAGGTCGAGGACGAATACGTCGTCGTCCTGAACGAGGACGGGTTGCCGCAGATGCGGATCAGCCCGGTCTATCGCCGGCTGCTCGACAAGGGCGCGAGCGACAACGACGAGACGCGCGCCTACGTGAAGGACAAGTTCCGATCGGCGCTCTGGCTGATCAAATCGGTCGAGCAGCGGCAGAAGACGATCTTCAAGGTCGCCAAAAGCATCGTCAATTTCCAGCGGGACTTCCTGGATCACGGCATCGAGCACCTGCGGCCGCTGGTGCTGCGCGACGTGGCGAACGACATCGGCATGCACGAGTCGACGGTCAGCCGCGTGGTGACGAACAAGTACATGCACACGCCCCAGGGCGTGTTCGAGATGAAGTACTTCTTCCACAGCGGCATCAGCAGCTCGTACGGCGAGAGCGTCTCGTCGGTGACGATCAAGCAGCGGATCCGGAAGATCATCGAGAACGAAGATCCGCGCAAGCCGCTCAGCGATTCGAAGATCGTCAGCATCCTGCAGCGCGAGGGACTCGTGCTCGCGCGGCGCACGATCGCGAAGTACCGCGAAGAGCTGAAGATTCCCACGTCCAATCAACGCAAGGTTCTCTACTGA
PROTEIN sequence
Length: 476
MGIQQKLHTKLVQKLILTPSLQQAIKLLPMSTLELSDLLNQEMVENPMLEEVPTEELQPAEAAAAPEKAEPEQQSNKTDTWDDQDYEYFFGDYLDDGYRPRAPQEVKELPPIENTLSTASSLSDHLMWQLSMQTDDSLIREIGSAIIGNLDDDGYLVASFDELAGMGPWPVAEVERALKLVQAFDPTGVAARDLQECLLLQLRHLGLEGTPTEKVVTDHLRLLQNHQVPEIARKLGMTIDDLKEHIEIIRHLDPKPGSRYNPTQSQYVIPDVYVMKVEDEYVVVLNEDGLPQMRISPVYRRLLDKGASDNDETRAYVKDKFRSALWLIKSVEQRQKTIFKVAKSIVNFQRDFLDHGIEHLRPLVLRDVANDIGMHESTVSRVVTNKYMHTPQGVFEMKYFFHSGISSSYGESVSSVTIKQRIRKIIENEDPRKPLSDSKIVSILQREGLVLARRTIAKYREELKIPTSNQRKVLY*