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13_1_40cm_scaffold_6176_11

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: 8725..9285

Top 3 Functional Annotations

Value Algorithm Source
rpoE; ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 185.0
  • Bit_score: 153
  • Evalue 6.20e-35
RNA polymerase sigma factor id=3733115 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 185.0
  • Bit_score: 153
  • Evalue 1.70e-34
rpoE1; RNA polymerase sigma factor RpoE1; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 185.0
  • Bit_score: 153
  • Evalue 2.30e-34

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCCGATCCCGACGAGCGACGCCGCCAGTTCGAGTCGATCGCCCTGCCGCTGATGCAGGGGCTCTACAACACCAGCCTCCGTCTCACCGCTGACGGAGATGAAGCTGCGGACATTGTGCAGGAGACATTCCTGCGGGCCTACCGGACCTTCGACAATTTCCGTCCCGGCACGAACGCCAGGGCATGGCTGTTCACGATTCTTTACTCGGTGTTTGCAAACCGGTACCATGAGGCGAAAAGACGGCCGCGGATGGAGGCGGTGGAGGAGCTGGAGGCCCCGGCCGGTCCCGAGTCTGACATCGCGCTCGTCGCAGCGTGGGGATCACGCTGGAATCCGGAAGTCGAGCGCGCCCTGCGCCGATTGCCGGAAGATTTTCGCACGCCACTGCTGTTGATCGATGTGGAGGGGCTGTCGTACGAGGAGGCCGCCGCGGTCCTGGGGTGCGCCGTCGGGACTGTCGGCTCGCGTCTGTTTCGCGGCCGCAAGCTGTTATACGCCATGCTGCAGGAGTATGCACATCAGGCGGGCTATGGTAAGCACAGTGCACCGGACCCATGA
PROTEIN sequence
Length: 187
MSDPDERRRQFESIALPLMQGLYNTSLRLTADGDEAADIVQETFLRAYRTFDNFRPGTNARAWLFTILYSVFANRYHEAKRRPRMEAVEELEAPAGPESDIALVAAWGSRWNPEVERALRRLPEDFRTPLLLIDVEGLSYEEAAAVLGCAVGTVGSRLFRGRKLLYAMLQEYAHQAGYGKHSAPDP*