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13_1_40cm_scaffold_6176

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6176_1
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..826)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035E5203
Uncharacterized protein {ECO:0000313|EMBL:KGB57738.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
13_1_40cm_scaffold_6176_2
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(823..1698)
DNA (876bp) protein (292aa)
ChrB protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000288DD28
ChrB protein {ECO:0000313|EMBL:ESX77908.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00
hypothetical protein
13_1_40cm_scaffold_6176_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1727..2194)
DNA (468bp) protein (156aa)
chromate resistance protein n=1 Tax=Pseudomonas RepID=UPI000364FB7D
Chromate resistance exported protein
Chromate resistance exported protein {ECO:0000313|EMBL:AHG88912.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_6176_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2268..3587)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QSW6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX64394.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_40cm_scaffold_6176_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4031..4480
DNA (450bp) protein (150aa)
Transcriptional regulator, PadR-like family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUL4_9CHLR
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:EFH84082.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedo
lstR; PadR family transcriptional regulator
13_1_40cm_scaffold_6176_6
unknown

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4477..4644
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_6176_7
unknown

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4652..5398
DNA (747bp) protein (249aa)

This feature has no annotations

13_1_40cm_scaffold_6176_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5417..6778
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADE1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40518.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_6176_9

Not on your lists

comp(7031..7834)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q2V5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI01515.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_40cm_scaffold_6176_10
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(7860..8618)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEG3_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83402.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_scaffold_6176_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8725..9285
DNA (561bp) protein (187aa)
rpoE; ECF subfamily RNA polymerase sigma-70 factor
RNA polymerase sigma factor id=3733115 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpoE1; RNA polymerase sigma factor RpoE1; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_6176_12
unknown

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9282..10070
DNA (789bp) protein (263aa)

This feature has no annotations

13_1_40cm_scaffold_6176_13
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10405..10959)
DNA (555bp) protein (185aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_42_7_curated
hypothetical protein id=15193736 bin=GWC2_NOV_55_46 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
13_1_40cm_scaffold_6176_trna_1
unknown

Not on your lists

11129..11200
DNA (72bp)
transferRNA
13_1_40cm_scaffold_6176_14
unknown

Not on your lists

comp(11236..11976)
DNA (741bp) protein (247aa)

This feature has no annotations

13_1_40cm_scaffold_6176_15
unknown

Not on your lists

comp(12117..12362)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_6176_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12379..13026)
DNA (648bp) protein (216aa)
pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
pilus retraction protein PilT; K02669 twitching motility protein PilT id=7200260 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
pilT; twitching mobility protein
Displaying 17 items

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